Download models Download Cα trajectory
Status: Done started: 2017-Sep-14 00:23:51 UTC
Project Name299_3
SequenceMGRKPCCAKE GLNRGAWTAE EDKILTNYIK THGEGKWRSL PKKAGLNRCG KSCRLRWLNY LRPGIKRGNI SPDEEELIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNT TLSKKLQGNS PQPKPNMSNE AEAKSKAADP PSPGSTHVVV RTKAIRCTKV LFSPDVADLV HLPSNSSPKA TSPPQSNLDT SASSSQQDDV SCDFLMLLDI DIDEFQLDDD SAMSDVNSSD DLGLLDEWDL EFWMESDSFQ DDFNGGASSS CCELAPGLEF DLTKCLASFL EADDEWAHWW LSEED
Secondary structure

CCCCCCCCCC CCCCCCCCHH HHHHHHHHHH HCCCCCCCHH HHHHCCCCCH HHHHHHHHHH CCCCCCCCCC CHHHHHHHHH HHHHHCCCCH HHHHHCCCCC HHHHHHHHHC CCCCCCCCCC CCCCCHHHHH CCCCHHHHCC HHHHHHHHHH HHHHHHHHHH HCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCHH HHHHHHHHHH HHHHHHCCCC CHHHHHHHCC CCCCCCCCCC CCCCCCCHHH HHHHHCCCCC CCCCCCCHHH HHHHHHHHHH HHCCCCCCCC CCCCC

Movie from predicted structures
To download the movie, right click on the desired file format:
Estimated finish time2017-Sep-14 05:21 UTC
Project Name299_3
Cluster #123456789101112
Cluster density103.9103.698.789.474.470.570.152.349.343.740.131.1
Cluster size2812252542401691541681541217310061
Average cluster RMSD2.72.22.62.72.32.22.42.92.51.72.52.0

Read about clustering method.

#123456789101112
RMSD 10.20 8.63 11.00 10.40 8.09 8.75 9.67 10.20 6.55 9.59 9.90 10.20
GDT_TS 0.38 0.39 0.36 0.37 0.41 0.38 0.37 0.35 0.42 0.37 0.39 0.33

The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.

#123456789101112
1 0.00 5.18 3.92 3.54 5.67 5.05 4.02 4.91 7.86 6.75 3.71 6.33
2 5.18 0.00 5.32 5.79 4.12 3.92 5.45 6.08 5.69 7.73 5.79 7.35
3 3.92 5.32 0.00 3.80 6.57 5.70 5.21 4.98 8.35 7.14 3.85 6.26
4 3.54 5.79 3.80 0.00 6.18 5.43 4.45 4.61 8.07 6.30 3.65 5.64
5 5.67 4.12 6.57 6.18 0.00 4.29 5.68 6.80 4.57 7.45 6.25 7.93
6 5.05 3.92 5.70 5.43 4.29 0.00 4.88 6.38 6.21 7.72 5.50 7.90
7 4.02 5.45 5.21 4.45 5.68 4.88 0.00 4.83 7.01 6.69 4.28 6.36
8 4.91 6.08 4.98 4.61 6.80 6.38 4.83 0.00 7.98 6.13 4.95 5.17
9 7.86 5.69 8.35 8.07 4.57 6.21 7.01 7.98 0.00 8.26 7.59 8.62
10 6.75 7.73 7.14 6.30 7.45 7.72 6.69 6.13 8.26 0.00 6.81 4.37
11 3.71 5.79 3.85 3.65 6.25 5.50 4.28 4.95 7.59 6.81 0.00 6.04
12 6.33 7.35 6.26 5.64 7.93 7.90 6.36 5.17 8.62 4.37 6.04 0.00

The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.

#123456789101112
1 1.00 0.48 0.59 0.59 0.46 0.46 0.55 0.53 0.40 0.50 0.64 0.49
2 0.48 1.00 0.48 0.45 0.61 0.58 0.50 0.48 0.49 0.39 0.48 0.38
3 0.59 0.48 1.00 0.55 0.48 0.48 0.55 0.57 0.39 0.44 0.58 0.45
4 0.59 0.45 0.55 1.00 0.43 0.45 0.57 0.55 0.39 0.51 0.56 0.58
5 0.46 0.61 0.48 0.43 1.00 0.54 0.50 0.48 0.56 0.41 0.49 0.39
6 0.46 0.58 0.48 0.45 0.54 1.00 0.53 0.49 0.41 0.41 0.48 0.40
7 0.55 0.50 0.55 0.57 0.50 0.53 1.00 0.64 0.41 0.51 0.56 0.48
8 0.53 0.48 0.57 0.55 0.48 0.49 0.64 1.00 0.40 0.53 0.55 0.50
9 0.40 0.49 0.39 0.39 0.56 0.41 0.41 0.40 1.00 0.39 0.42 0.36
10 0.50 0.39 0.44 0.51 0.41 0.41 0.51 0.53 0.39 1.00 0.52 0.58
11 0.64 0.48 0.58 0.56 0.49 0.48 0.56 0.55 0.42 0.52 1.00 0.51
12 0.49 0.38 0.45 0.58 0.39 0.40 0.48 0.50 0.36 0.58 0.51 1.00

The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.


 

© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013