CABS-flex server
Download models Download Cα trajectory
Status: Done started: 2018-Nov-28 21:44:52 UTC
Project Name
SequenceEKIRTFAVAI VGVGGVGSVT AEMLTRCGIG KLLLFDYDKV HQAGLSKVQA AEHTLRNINP DVLFEVHNYN ITTVENFQHF MDRISNGGLE EGKPVDLVLS CVDNFEARMT INTACNELGQ TWMESGVSEN AVSGHIQLII PGESACFACA PPLVVAANRE GVCAASLPTT MGVVAGILVQ NVLKFLLNFG TVSFYLGYNA MQDFFPTMSM KPNPQCDDRN CRKQQEEYKK K
Secondary structure

CCCCCCEEEE ECCCHHHHHH HHHHHHHCCC EEEEECCCCC CCCCCCHHHH HHHHHHHHCC CCEEEEECCC CCCHHHHHHH HHHHHHCCCC CCCCCCEEEE CCCCHHHHHH HHHHHHHHCC CEEEEEECCC CCEEEEEEEC CCCCCCCCCC CCCCCCCCCC CHHHHHHHHH HHHHHHHHHH HHHHHHCCCC CCCCEEEEEC CCCCCCEECC CCCCCCCCHH HHHHHHHHHH C

Movie from predicted structures
To download the movie, right click on the desired file format:
Estimated finish time2018-Nov-29 01:34 UTC
Project Name
Clustering data
Cluster #123456789101112
Cluster density291.3191.4176.8166.8166.0154.6141.3135.688.372.747.043.7
Cluster size347233216208211172152164123854445
Average cluster RMSD1.21.21.21.21.31.11.11.21.41.20.91.0

Read about clustering method.

Cα RMSD & GDT_TS to the input structure
#123456789101112
RMSD 2.47 2.74 2.62 2.64 2.67 2.69 2.83 2.98 2.55 2.56 2.44 2.61
GDT_TS 0.75 0.70 0.72 0.76 0.73 0.71 0.71 0.69 0.76 0.75 0.76 0.73

The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.

Cα RMSD between predicted models
#123456789101112
1 0.00 1.89 1.85 2.51 2.33 1.83 2.32 2.31 2.19 2.27 2.32 2.03
2 1.89 0.00 1.73 2.75 2.54 2.18 2.30 2.23 2.26 2.72 2.31 1.87
3 1.85 1.73 0.00 2.74 2.43 2.27 2.30 2.20 2.42 2.49 2.33 2.06
4 2.51 2.75 2.74 0.00 1.81 2.49 2.49 2.42 1.96 2.02 2.01 2.43
5 2.33 2.54 2.43 1.81 0.00 2.33 2.09 2.00 1.48 1.93 1.69 2.11
6 1.83 2.18 2.27 2.49 2.33 0.00 2.44 2.45 2.25 2.27 2.34 2.19
7 2.32 2.30 2.30 2.49 2.09 2.44 0.00 1.79 2.25 2.56 2.48 2.02
8 2.31 2.23 2.20 2.42 2.00 2.45 1.79 0.00 2.14 2.57 2.32 1.86
9 2.19 2.26 2.42 1.96 1.48 2.25 2.25 2.14 0.00 2.08 1.76 2.04
10 2.27 2.72 2.49 2.02 1.93 2.27 2.56 2.57 2.08 0.00 2.15 2.42
11 2.32 2.31 2.33 2.01 1.69 2.34 2.48 2.32 1.76 2.15 0.00 1.89
12 2.03 1.87 2.06 2.43 2.11 2.19 2.02 1.86 2.04 2.42 1.89 0.00

The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.

Cα GDT_TS between predicted models
#123456789101112
1 1.00 0.77 0.80 0.72 0.72 0.78 0.73 0.71 0.72 0.75 0.72 0.76
2 0.77 1.00 0.80 0.68 0.69 0.75 0.74 0.74 0.72 0.69 0.72 0.77
3 0.80 0.80 1.00 0.68 0.73 0.77 0.73 0.73 0.71 0.70 0.74 0.76
4 0.72 0.68 0.68 1.00 0.80 0.69 0.73 0.75 0.80 0.79 0.78 0.74
5 0.72 0.69 0.73 0.80 1.00 0.72 0.77 0.78 0.84 0.77 0.84 0.76
6 0.78 0.75 0.77 0.69 0.72 1.00 0.72 0.71 0.72 0.71 0.71 0.74
7 0.73 0.74 0.73 0.73 0.77 0.72 1.00 0.79 0.76 0.71 0.73 0.78
8 0.71 0.74 0.73 0.75 0.78 0.71 0.79 1.00 0.76 0.70 0.73 0.80
9 0.72 0.72 0.71 0.80 0.84 0.72 0.76 0.76 1.00 0.77 0.81 0.76
10 0.75 0.69 0.70 0.79 0.77 0.71 0.71 0.70 0.77 1.00 0.77 0.75
11 0.72 0.72 0.74 0.78 0.84 0.71 0.73 0.73 0.81 0.77 1.00 0.80
12 0.76 0.77 0.76 0.74 0.76 0.74 0.78 0.80 0.76 0.75 0.80 1.00

The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.


 

© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013