Download models Download Cα trajectory
Status: Done started: 2017-Sep-14 13:55:44 UTC
Project Name3a3q3p4
SequenceMTSCGALDTF RRCVSSCSCN NSIMAAFKGV WTQEFWRAVS GEFLAMIIFV LLSLGSTINW GAKQENPPPA DLVLISLCFG LSIATLVQCF GHISGAHINP AVTVAMVATR KLSLAKGVFY LLAQCLGAVV GAAILYGVTP ASVRGGMGVT SVNEEISAGH AIVIELIITF ELVFTVFATC DPKRNDLKGS AALAIGLSVC IGHLFAIPYT GASMNPARSF GPAVIMVKWQ DHWVYWVGPL IGGILAAAVY EYLFCPDPDL KRRYADVLSK SPFQMEPYRV VDTDSYPSDQ AQLMAKQAAL RVLDLEKKER ESTGEVLSSV
Secondary structure

CCCCCCCCCC EEEECCCCCE EEECCCCCCE EEECHHHHHH HHHHHHHHHH HHHHHHHHHH CCCCCCCCCC CCHHHHHHHH HHHHHHHHHH HHCCCCCCCH HHHHHHHHHC CCCCHHHHHH HHHHHHHHHH HHHHHHHHCC HHHHHCCCCC CCCCCHHHHH HHHHHHHHHH HHHHHHHHHH CCHHHHHCCC CCHHHHHHHH HHHHHHCCCC CCCCCCHHHH CCCCCCCCCC CCHHHHHHHH HHHHHHHHHH HHHHCCCCCC CCCHHHHHHC CCCCCCCCCC CCCCCCCCCC CCCCCCCHHH HHCCHHHHHH HCCCCCCCCC

Movie from predicted structures
To download the movie, right click on the desired file format:
Estimated finish time2017-Sep-14 18:56 UTC
Project Name3a3q3p4
Cluster #123456789101112
Cluster density305.7197.9157.3131.6129.8118.0103.599.693.084.176.743.1
Cluster size38027620316918314113913111510610156
Average cluster RMSD1.21.41.31.31.41.21.31.31.21.31.31.3

Read about clustering method.

#123456789101112
RMSD 3.32 2.73 2.83 2.72 3.09 2.81 2.77 2.81 3.05 2.56 2.88 2.55
GDT_TS 0.64 0.72 0.73 0.71 0.69 0.71 0.70 0.70 0.70 0.70 0.71 0.71

The table contains RMSD and GDT_TS values (calculated on the Cα atoms) between the predicted models and the input structure. Note that GDT_TS metric is intended as a more accurate measurement than the more common RMSD.
Read more about the root-mean-square deviation (RMSD) measure
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.

#123456789101112
1 0.00 2.29 2.58 2.52 2.24 2.15 2.38 2.34 2.68 2.88 2.67 3.02
2 2.29 0.00 2.13 2.48 2.14 2.05 2.04 2.17 2.29 2.70 2.69 2.88
3 2.58 2.13 0.00 2.39 2.03 2.24 2.32 2.21 2.53 2.78 2.36 2.80
4 2.52 2.48 2.39 0.00 2.44 2.55 2.40 2.15 2.31 2.24 2.29 2.57
5 2.24 2.14 2.03 2.44 0.00 1.93 2.27 2.04 2.47 2.95 2.64 2.92
6 2.15 2.05 2.24 2.55 1.93 0.00 2.21 2.27 2.66 2.76 2.57 2.70
7 2.38 2.04 2.32 2.40 2.27 2.21 0.00 2.09 2.28 2.75 2.38 2.90
8 2.34 2.17 2.21 2.15 2.04 2.27 2.09 0.00 2.13 2.59 2.31 2.70
9 2.68 2.29 2.53 2.31 2.47 2.66 2.28 2.13 0.00 2.58 2.24 2.85
10 2.88 2.70 2.78 2.24 2.95 2.76 2.75 2.59 2.58 0.00 2.55 2.06
11 2.67 2.69 2.36 2.29 2.64 2.57 2.38 2.31 2.24 2.55 0.00 2.62
12 3.02 2.88 2.80 2.57 2.92 2.70 2.90 2.70 2.85 2.06 2.62 0.00

The table contains RMSD values (calculated on the Cα atoms) between the predicted models.
Read more about the root-mean-square deviation (RMSD) measure.

#123456789101112
1 1.00 0.72 0.66 0.70 0.70 0.72 0.70 0.73 0.68 0.67 0.69 0.67
2 0.72 1.00 0.74 0.71 0.75 0.75 0.77 0.74 0.75 0.69 0.70 0.69
3 0.66 0.74 1.00 0.73 0.73 0.72 0.74 0.73 0.74 0.70 0.75 0.68
4 0.70 0.71 0.73 1.00 0.70 0.69 0.71 0.74 0.72 0.75 0.73 0.71
5 0.70 0.75 0.73 0.70 1.00 0.78 0.73 0.75 0.74 0.65 0.68 0.66
6 0.72 0.75 0.72 0.69 0.78 1.00 0.75 0.74 0.72 0.68 0.70 0.70
7 0.70 0.77 0.74 0.71 0.73 0.75 1.00 0.77 0.76 0.68 0.74 0.68
8 0.73 0.74 0.73 0.74 0.75 0.74 0.77 1.00 0.76 0.69 0.72 0.69
9 0.68 0.75 0.74 0.72 0.74 0.72 0.76 0.76 1.00 0.71 0.75 0.71
10 0.67 0.69 0.70 0.75 0.65 0.68 0.68 0.69 0.71 1.00 0.72 0.77
11 0.69 0.70 0.75 0.73 0.68 0.70 0.74 0.72 0.75 0.72 1.00 0.70
12 0.67 0.69 0.68 0.71 0.66 0.70 0.68 0.69 0.71 0.77 0.70 1.00

The table contains GDT_TS values (calculated on the Cα atoms) between the predicted models.
Read more about the global distance test (GDT, also written as GDT_TS to represent "total score") measure.


 

© Laboratory of Theory of Biopolymers, Faculty of Chemistry, University of Warsaw 2013