TY - JOUR T1 - HCPM–program for hierarchical clustering of protein models JF - Bioinformatics Y1 - 2005 A1 - Dominik Gront A1 - Andrzej Koliński KW - Algorithms KW - Chemical KW - Cluster Analysis KW - Computer Simulation KW - Internet KW - Models KW - Molecular KW - Protein KW - Protein: methods KW - Proteins KW - Proteins: analysis KW - Proteins: chemistry KW - Sequence Alignment KW - Sequence Alignment: methods KW - Sequence Analysis KW - Software KW - User-Computer Interface AB - HCPM is a tool for clustering protein structures from comparative modeling, ab initio structure prediction, etc. A hierarchical clustering algorithm is designed and tested, and a heuristic is provided for an optimal cluster selection. The method has been successfully tested during the CASP6 experiment. VL - 21 UR - http://www.ncbi.nlm.nih.gov/pubmed/15840705 ER -