Andrzej Kolinski Research Group

Coarse-grained protein modeling

Modeling Software & Servers

Biomolecules — dynamics & interactions



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Coarse-Grained Modeling of Protein DynamicsKmiecik, S., Wabik, J., Kolinski, M., Kouza, M. & Koliński, A.Computational Methods to Study the Structure and Dynamics of Biomolecules and Biomolecular Processes, Springer Series in Bio-/Neuroinformatics, Adam Liwo, Ed. 1, 55-79, 2014.
Protocols for efficient simulations of long time protein dynamics using coarse-grained CABS modelJamroz, M., Koliński, A. & Kmiecik, S.Protein structure prediction (3rd Edition), Methods in Molecular Biology, Daisuke Kihara, Ed. 1137, 235-250, 2014.
Characterization of protein-folding pathways by reduced-space modelingKmiecik, S. & Koliński, A.Proceedings of the National Academy of Sciences of the United States of America 104, 12330–5, 2007.
Monte Carlo approaches to the protein folding problemSkolnick, J. & Koliński, A.Advances in Chemical Physics: Monte Carlo Methods in Chemical Physics 105, 203–242, 1999.