Andrzej Kolinski Research Group

Coarse-grained protein modeling

Modeling Software & Servers

Biomolecules — dynamics & interactions

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Publications

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Filters: Keyword is Molecular Dynamics Simulation  [Clear All Filters]
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A Stevedore's protein knot.Bölinger, D. et al.PLoS Comput Biol 6, e1000731, 2010.
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Characterization of protein-folding pathways by reduced-space modelingKmiecik, S. & Koliński, A.Proceedings of the National Academy of Sciences of the United States of America 104, 12330–5, 2007.
Multiscale approach to protein folding dynamicsKmiecik, S., Jamroz, M., Koliński, A. & Koliński, A.Multiscale Approaches to Protein Modeling 281-294, 2011.
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Slipknotting upon native-like loop formation in a trefoil knot protein.Noel, J.K., Sulkowska, J.I. & Onuchic, J.N.Proceedings of the National Academy of Sciences of the United States of America 107, 15403-8, 2010.
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Genomics-aided structure prediction.Sulkowska, J.I., Morcos, F., Weigt, M., Hwa, T. & Onuchic, J.N.Proceedings of the National Academy of Sciences of the United States of America 109, 10340-5, 2012.
Energy landscape of knotted protein folding.Sulkowska, J.I., Noel, J.K. & Onuchic, J.N.Proceedings of the National Academy of Sciences of the United States of America 109, 17783-8, 2012.