Publications
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Author Title Type [ Year] Filters: First Letter Of Title is A [Clear All Filters]
Assignments of nitrogen NMR shieldings in azine heterocycles by means of a self-adjusting linear system of incremensInternational Journal of Spectroscopy 7, 315-324, 1989.
Are proteins ideal mixtures of amino acids? Analysis of energy parameter setsProtein Science: a Publication of the Protein Society 4, 2107–2117, 1995.
Assessment of Solvent-Induced Nitrogen Shielding Variations of Triazole SystemsJournal of Magnetic Resonance, Series A 112, 66 - 71, 1995.
An algorithm for prediction of structural elements in small proteinsProceeding of I-st Pacific Symposium on Biocomputing 446–460, 1996.
Algorithm for rapid reconstruction of protein backbone from alpha carbon coordinatesJournal of Computational Chemistry 18, 80–85, 1997.
Application of a high coordination lattice model in protein structure predictionProceedings of HRLC Workshop pp, 100–130, 1998.
Assembly of protein structure from sparse experimental data: an efficient Monte Carlo modelProteins 32, 475–494, 1998.
Ab initio folding of proteins using restraints derived from evolutionary informationProteins Suppl. 3, 177–185, 1999.
Application of reduced models to protein structure predictionTheoretical and Computational Chemistry: Computational Molecular Biology 8, 397–440, 1999.
Assessing energy functions for flexible dockingJournal of Computational Chemistry 19, 1612–1622, 1999.
Ab initio protein structure prediction on a genomic scale: application to the Mycoplasma genitalium genomeProceedings of the National Academy of Sciences of the United States of America 99, 5993–5998, 2002.
Ab initio modelingStructural Genomics and High Throughput Structural Biology 137-162, 2006.
Analysis and optimization of interactions between peptides mimicking the GD2 ganglioside and the monoclonal antibody 14G2aInternational Journal of Molecular Medicine 28, 47–57, 2011.
Assessment of the free binding energy of 1,25-dihydroxyvitamin D3 and its analogs with the human VDR receptor modelActa Biochimica Polonica 59, 653-660, 2012.
AGGRESCAN3D (A3D): server for prediction of aggregation properties of protein structuresNucleic Acids Research 43 (W1), W306-W313, 2015.
Aggrescan3D (A3D) 2.0: prediction and engineering of protein solubilityNucleic Acids Research 47, W300-W307, 2019.
Aggrescan3D standalone package for structure-based prediction of protein aggregation propertiesBioinformatics btz143, , 2019.