Publications
Pages
Wpływ glikolu propylenowego na transepidermalny transport substancji czynnychSOFW-Journal Polish Edition 2, 24-32, 2010.
Wieloskalowe modelowanie białek (Multiscale protein modeling)Na pograniczu chemii i biologii (At the treshold of chemistry and biology) 17, 239-256, 2008.
Why do proteins divide into domains? Insights from lattice model simulationsBiomacromolecules 8, 3519–24, 2007.
Water Contents and Calculation of Equilibrium Constraints in Benzene Phase on System Water - Benzene - (-OH, -COOH, -NH2, -NO2, -C1) Benzene DerivativePolish Journal of Chemistry 56, 1169-1173, 1982.
Velocity scaling for optimizing replica exchange molecular dynamicsThe Journal of Chemical Physics 134, 044124, 2011.
Use of residual dipolar couplings as restraints in ab initio protein structure predictionBiopolymers 70, 548–562, 2003.
Universal geometrical factor of protein conformations as a consequence of energy minimizationEPL (Europhysics Letters) 96:68005 doi: 10.1209/0295-5075/96/68005, , 2011.
A unified approach to the prediction of protein structure and functionComputational Methods for Protein Folding 120, , 2002.
A unified approach to the prediction of protein structure and functionAdvances in Chemical Physics 120, 131–192, 2002.
Unfolding of globular proteins: monte carlo dynamics of a realistic reduced modelBiophysical Journal 85, 3271–3278, 2003.
The unexpectedly low sensitivity of the nitrogen NMR shieldings of covalent azides to solvent effectsInternational Journal of Spectroscopy 12, 25-29, 1994.
Uncharacterized DUF1574 leptospira proteins are SGNH hydrolasesCell Cycle (Georgetown, Tex.) 7, 542–4, 2008.
Type II restriction endonuclease R.Eco29kI is a member of the GIY-YIG nuclease superfamilyBMC Structural Biology 7, 48, 2007.
TRACER. A new approach to comparative modeling that combines threading with free-space conformational samplingActa Biochimica Polonica 57, 125–33, 2010.
T-Pile–a package for thermodynamic calculations for biomoleculesBioinformatics (Oxford, England) 23, 1840–1842, 2007.
Towards the high-resolution protein structure prediction. Fast refinement of reduced models with all-atom force fieldBMC Structural Biology 7, 43, 2007.
Towards protein-protein docking with significant structural changes using CABS-dockProceedings of the International Work-conference on Bioinformatics and BIOmedical engineering (IWWBIO) in Granada, Spain, 207-213, arXiv:1605.09266 , 2016.
TOUCHSTONE II: a new approach to ab initio protein structure predictionBiophysical Journal 85, 1145–64, 2003.
TOUCHSTONE: an ab initio protein structure prediction method that uses threading-based tertiary restraintsProceedings of the National Academy of Sciences of the United States of America 98, 10125–30, 2001.