Distance matrix-based approach to protein structure predictionJournal of Structural and Functional Genomics 10, 67–81, 2009.
Ideal amino acid exchange forms for approximating substitution matricesProteins: Structure, Function, Bioinformatics 69, 379–393, 2007.
Inferring ideal amino acid interaction forms from statistical protein contact potentialsProteins 59, 49–57, 2005.
A minimal physically realistic protein-like lattice model: designing an energy landscape that ensures all-or-none folding to a unique native stateBiophysical Journal 84, 1518–26, 2003.
A minimal proteinlike lattice model: an alpha-helix motifThe Journal of Chemical Physics 122, 214915, 2005.