Andrzej Kolinski Research Group

Coarse-grained protein modeling

Modeling Software & Servers

Biomolecules — dynamics & interactions



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Simulations of the Folding Pathway of TIM-type a/ß Barrel ProteinsGodzik, A., Skolnick, J. & Koliński, A.Proceedings of the National Academy of Sciences of the United States of America 89, 2629–2633, 1992.
Are proteins ideal mixtures of amino acids? Analysis of energy parameter setsGodzik, A., Koliński, A. & Skolnick, J.Protein Science: a Publication of the Protein Society 4, 2107–2117, 1995.
Exploring protein energy landscapes with hierarchical clusteringGront, D., Hansmann, U.H.E. & Koliński, A.International Journal of Quantum Chemistry 105, 826–830, 2005.
Protein structure prediction by tempering spatial constraintsGront, D., Koliński, A. & Hansmann, U.H.E.Journal of Computer-Aided Molecular Design 19, 603–8, 2005.
Optimization of protein modelsGront, D., Kmiecik, S., Blaszczyk, M., Ekonomiuk, D. & Koliński, A.Wiley Interdisciplinary Reviews: Computational Molecular Science 2, 479–493, 2012.
Wieloskalowe modelowanie białek (Multiscale protein modeling)Gront, D. et al.Na pograniczu chemii i biologii (At the treshold of chemistry and biology) 17, 239-256, 2008.