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Publications

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De novo simulations of the folding thermodynamics of the GCN4 leucine zipperMohanty, D., Koliński, A. & Skolnick, J.Biophysical Journal 77, 54–69, 1999.
Correlation between knowledge-based and detailed atomic potentials: application to the unfolding of the GCN4 leucine zipperMohanty, D., Dominy, B.N., Koliński, A., Brooks, III, C.L. & Skolnick, J.Proteins 35, 447–452, 1999.
Identifying knots in proteins.Millett, K.C., Rawdon, E.J., Stasiak, A. & Sulkowska, J.I.Biochemical Society Transactions 41, 533-7, 2013.
Algorithm for rapid reconstruction of protein backbone from alpha carbon coordinatesMilik, M., Koliński, A. & Skolnick, J.Journal of Computational Chemistry 18, 80–85, 1997.
Neural network system for the evaluation of side-chain packing in protein structuresMilik, M., Koliński, A. & Skolnick, J.Protein Engineering 8, 225–236, 1995.
Monte Carlo dynamics of a dense system of chain molecules constrained to lie near an interface. A simplified membrane modelMilik, M., Koliński, A. & Skolnick, J.The Journal of Chemical Physics 93, 4440–4446, 1990.
Monte Carlo studies of an idealized model of a lipid-water systemMilik, M., Skolnick, J. & Koliński, A.The Journal of Physical Chemistry 96, 4015–4022, 1992.
Theoretical model of prion propagation: a misfolded protein induces misfoldingMałolepsza, E., Boniecki, M., Koliński, A. & Piela, L.Proceedings of the National Academy of Sciences of the United States of America 102, 7835–40, 2005.
In silico analysis of cytochrome P450 monooxygenases in chronic granulomatous infectious fungus Sporothrix schenckii: Special focus on CYP51.Matowane, R.Godfrey et al.Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics 1866(1), 166-177, 2018.