Andrzej Kolinski Research Group

Coarse-grained protein modeling

Modeling Software & Servers

Biomolecules — dynamics & interactions

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Publications

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Protein Structure Prediction Using CABS – A Consensus ApproachBlaszczyk, M., Jamroz, M., Gront, D. & Koliński, A.From Computational Biophysics to Systems Biology (CBSB11) Proceedings 8, 29–32, 2012.
Coarse-Grained Protein Models in Structure PredictionBlaszczyk, M. et al.Computational Methods to Study the Structure and Dynamics of Biomolecules and Biomolecular Processes, Springer Series in Bio-/Neuroinformatics, Adam Liwo, Ed. 1, 25-53, 2014.
Protein Structure Prediction Using Coarse-Grained ModelsBlaszczyk, M. et al.Computational Methods to Study the Structure and Dynamics of Biomolecules and Biomolecular Processes: From Bioinformatics to Molecular Quantum Mechanics 27–59, 2019.
A Stevedore's protein knot.Bölinger, D. et al.PLoS Comput Biol 6, e1000731, 2010.
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Towards protein-protein docking with significant structural changes using CABS-dockCiemny, M., Kurcinski, M., Koliński, A. & Kmiecik, S.Proceedings of the International Work-conference on Bioinformatics and BIOmedical engineering (IWWBIO) in Granada, Spain, 207-213, arXiv:1605.09266 , 2016.
Protein-peptide docking: opportunities and challengesCiemny, M.Pawel et al.Drug Discovery Today 23, 1530-1537, 2018.

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