Publications
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Author Title [ Type] Year Filters: First Letter Of Last Name is L [Clear All Filters]
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Template-free predictions of three-dimensional protein structures: From first principles to knowledge-based potentialsPrediction of Protein Structures, Functions, and Interactions 117-142, 2008.
Wieloskalowe modelowanie białek (Multiscale protein modeling)Na pograniczu chemii i biologii (At the treshold of chemistry and biology) 17, 239-256, 2008.
Human telomerase model shows the role of the TEN domain in advancing the double helix for the next polymerization stepProceedings of the National Academy of Sciences of the United States of America 108, 9443–8, 2011.
Modeling protein structure, dynamics and thermodynamics with reduced representation of conformational spaceNIC Workshop 2006: From Computational Biophysics to System Biology 34, 21-28, 2006.
Ab initio protein structure prediction on a genomic scale: application to the Mycoplasma genitalium genomeProceedings of the National Academy of Sciences of the United States of America 99, 5993–5998, 2002.
CABS-NMR–De novo tool for rapid global fold determination from chemical shifts, residual dipolar couplings and sparse methyl-methyl NOEsJournal of c\Computational Chemistry 32, 536–44, 2011.
Combining MONSSTER and LES/PME to Predict Protein Structure from Amino Acid Sequence: Application to the Small Protein CMTI-1Journal of the American Chemical Society 122, 8392–8402, 2000.
Combining Structural Aggregation Propensity and Stability Predictions To Redesign Protein SolubilityMolecular Pharmaceutics 15, 3846-3859, 2018.
Connecting thermal and mechanical protein (un)folding landscapesBiophysical Journal 107(12), 2950-61, 2014.
Contact prediction in protein modeling: scoring, folding and refinement of coarse-grained modelsBMC Structural Biology 8, 36, 2008.
Correlated fluctuations of microparticles in viscoelastic solutions: quantitative measurement of material properties by microrheology in the presence of optical traps.Phys Rev E Stat Nonlin Soft Matter Phys 73, 061501, 2006.
Dependence of protein mechanical unfolding pathways on pulling speedsThe Journal of Chemical Physics 130, 145102, 2009.
A detailed 1H and 13C NMR study of a repeating disaccharide of hyaluronan: the effect of sodium and calcium ionsCarbohydrate Research 286, 151 - 159, 1996.
A detailed 1H and 13C NMR study of a repeating disaccharide of hyaluronan: the effects of temperature and counterion typeCarbohydrate Research 242, 29 - 51, 1993.
A detailed 1H and 13C NMR study of a repeating disaccharide of hyaluronan: the effect of sodium and calcium ionsCarbohydrate Research 286, 151-159, 1996.
Effect of double bonds on the dynamics of hydrocarbon chainsJournal of Chemical Physics 97, 1240–1249, 1992.
Effect of Finite Size on Cooperativity and Rates of Protein FoldingâThe Journal of Physical Chemistry A 110, 671-676, 2006.
Inhibition of Fibril Formation of Beta-Amyloid PeptidesFrom Computational Biophysics to Systems Biology (CBSB08) Proceedings 40, 121-124, 2008.
Inhibition of Fibril Formation of Beta-Amyloid PeptidesFrom Computational Biophysics to Systems Biology (CBSB08) Proceedings 40, 121-124, 2008.
Isoxazole-containing 5′ mRNA cap analogues as inhibitors of the translation initiation processBioorganic Chemistry 96, 103583, 2020.
Key Factors Governing Fibril Formation Of Proteins: Insights From Simulations And ExperimentsTask Quarterly 18, 245–254, 2014.
Kinetics and mechanical stability of the fibril state control fibril formation time of polypeptide chains: A computational studyThe Journal of Chemical Physics 148, 215106, 2018.
A lattice dynamics study of a Langmuir monolayer fatty acidsJournal of Chemical Physics 98, 7581–7587, 1993.