Maciej Blaszczyk

Publications of this author

[16]

Protein Structure Prediction Using Coarse-Grained Models

Author(s): M. Blaszczyk, D. Gront, S. Kmiecik, M. Kurcinski, M. Kolinski, M. Ciemny, K. Ziolkowska, M. Panek, A. Koliński

Computational Methods to Study the Structure and Dynamics of Biomolecules and Biomolecular Processes: From Bioinformatics to Molecular Quantum Mechanics, 27–59, 2019

[15]

Protein–peptide docking using CABS-dock and contact information

Author(s): M. Blaszczyk, M. Ciemny, A. Koliński, M. Kurcinski, S. Kmiecik

Briefings in Bioinformatics, bby080, 2018

[14]

A protocol for CABS-dock protein–peptide docking driven by side-chain contact information

Author(s): M. Kurcinski, M. Blaszczyk, M. Ciemny, A. Koliński, S. Kmiecik

BioMedical Engineering OnLine, 16:73, 2017

[13]

Modeling EphB4-EphrinB2 protein–protein interaction using flexible docking of a short linear motif

Author(s): M. Ciemny, M. Kurcinski, M. Blaszczyk, A. Koliński, S. Kmiecik

BioMedical Engineering OnLine, 16:71, 2017

[12]

Flexible protein-peptide docking using CABS-dock with knowledge about the binding site

Author(s): M. Kurcinski, M. Ciemny, M. Blaszczyk, A. Koliński, S. Kmiecik

Proceedings of the International Work-conference on Bioinformatics and BIOmedical engineering (IWWBIO) in Granada, Spain, 195-201, arXiv:1605.09269, 2016

[11]

Modeling of protein-peptide interactions using the CABS-dock web server for binding site search and flexible docking

Author(s): M. Blaszczyk, M. Kurcinski, M. Kouza, L. Wieteska, A. Debinski, A. Koliński, S. Kmiecik

Methods, 93:72–83, 2016

[10]

CABS-dock web server for the flexible docking of peptides to proteins without prior knowledge of the binding site

Author(s): M. Kurcinski, M. Jamroz, M. Blaszczyk, A. Koliński, S. Kmiecik

Nucleic Acids Research, 43 (W1):W419-W424, 2015

[9]

Coarse-grained modeling of protein structure, dynamics and protein-protein interactions

Author(s): A. Koliński, S. Kmiecik, M. Jamroz, M. Blaszczyk, M. Kouza, M. Kurcinski

TASK Quarterly, 18:219–229, 2014

[8]

Coarse-Grained Protein Models in Structure Prediction

Author(s): M. Blaszczyk, D. Gront, S. Kmiecik, K. Ziolkowska, M. Panek, A. Koliński

Computational Methods to Study the Structure and Dynamics of Biomolecules and Biomolecular Processes, Springer Series in Bio-/Neuroinformatics, Adam Liwo, Ed., 1:25-53, 2014

[7]

CABS-fold: server for the de novo and consensus-based prediction of protein structure

Author(s): M. Blaszczyk, M. Jamroz, S. Kmiecik, A. Koliński

Nucleic Acids Research, 41:W406-W411, 2013

Pages

e-mail address: mblaszczyk@chem.uw.edu.pl

phone# (+48) 22 55 26 364

Faculty of Chemistry, University of Warsaw
ul. Pasteura 1
02-093 Warsaw
Poland

2016	PhD
2009	MSc

Andrzej Kolinski Research Group

Coarse-grained protein modeling

Modeling Software & Servers

Multiscale molecular modeling

Biomolecules — dynamics & interactions

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