Algorithm for rapid reconstruction of protein backbone from alpha carbon coordinatesJournal of Computational Chemistry 18, 80–85, 1997.
Collapse transitions in protein-like lattice polymers: The effect of sequence patternsBiopolymers 42, 537–548, 1997.
Derivation and testing of pair potentials for protein folding. When is the quasichemical approximation correct?Protein Science 6, 676–688, 1997.
Determinants of secondary structure of polypeptide chains: Interplay between short range and burial interactionsJournal of Chemical Physics 107, 953–964, 1997.
High coordination lattice models of protein structure, dynamics and thermodynamicsActa Biochim Polonica 44, 389–422, 1997.
Method for low resolution prediction of small protein tertiary structureProceeding of II-nd Pacific Symposium on Biocomputing 316–327, 1997.
A method for the prediction of surface "U"-turns and transglobular connections in small proteinsProteins 27, 290–308, 1997.
MONSSTER: a method for folding globular proteins with a small number of distance restraintsJournal of Molecular Biology 265, 217–241, 1997.
An algorithm for prediction of structural elements in small proteinsProceeding of I-st Pacific Symposium on Biocomputing 446–460, 1996.
Does a backwardly read protein sequence have a unique native state?Protein Engineering 9, 5–14, 1996.
Folding simulations and computer redesign of protein A three-helix bundle motifsProteins 25, 286–299, 1996.
A hierarchical approach to the prediction of the quaternary structure of GCN4 and its mutantsDIMACS Series in Discrete Mathematics and Theoretical Computer Science 23, 233–236, 1996.
Lattice models of protein folding. Dynamics and thermodynamicsLattice models of protein folding. Dynamics and thermodynamics, Austin, TX, Chapman & Hall. (Chapman & Hall.: Austin, TX, 1996).
Method for predicting the state of association of discretized protein models. Application to leucine zippers.Biochemistry 35, 955–967, 1996.
On the origin of the cooperativity of protein folding: implications from model simulationsProteins 26, 271–287, 1996.
Are proteins ideal mixtures of amino acids? Analysis of energy parameter setsProtein Science: a Publication of the Protein Society 4, 2107–2117, 1995.
De novo simulations of the folding of GCN4 and its mutantsModeling of Biomolecular Structures and Mechanisms 8, 95–98, 1995.
Neural network system for the evaluation of side-chain packing in protein structuresProtein Engineering 8, 225–236, 1995.
Prediction of quaternary structure of coiled coils. Application to mutants of the GCN4 leucine zipperJournal of Molecular Biology 251, 448–67, 1995.
A reduced model of short range interactions in polypeptide chainsJournal of Chemical Physics 103, 4312–4323, 1995.