Andrzej Kolinski Research Group

Coarse-grained protein modeling

Modeling Software & Servers

Biomolecules — dynamics & interactions

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Mateusz Kurciński

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2019
Protein Structure Prediction Using Coarse-Grained ModelsBlaszczyk, M. et al.Computational Methods to Study the Structure and Dynamics of Biomolecules and Biomolecular Processes: From Bioinformatics to Molecular Quantum Mechanics 27–59, 2019.
2016
Flexible protein-peptide docking using CABS-dock with knowledge about the binding siteKurcinski, M., Ciemny, M., Blaszczyk, M., Koliński, A. & Kmiecik, S.Proceedings of the International Work-conference on Bioinformatics and BIOmedical engineering (IWWBIO) in Granada, Spain, 195-201, arXiv:1605.09269 , 2016.
Towards protein-protein docking with significant structural changes using CABS-dockCiemny, M., Kurcinski, M., Koliński, A. & Kmiecik, S.Proceedings of the International Work-conference on Bioinformatics and BIOmedical engineering (IWWBIO) in Granada, Spain, 207-213, arXiv:1605.09266 , 2016.
2011
Human telomerase model shows the role of the TEN domain in advancing the double helix for the next polymerization stepSteczkiewicz, K. et al.Proceedings of the National Academy of Sciences of the United States of America 108, 9443–8, 2011.
Multiscale protein and peptide dockingKurcinski, M., Jamroz, M. & Koliński, A.Multiscale Approaches to Protein Modeling 21-34, 2011.
2008
Wieloskalowe modelowanie białek (Multiscale protein modeling)Gront, D. et al.Na pograniczu chemii i biologii (At the treshold of chemistry and biology) 17, 239-256, 2008.
2007
Hierarchical modeling of protein interactionsKurcinski, M. & Koliński, A.Journal of Molecular Modeling 13, 691–698, 2007.

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