Project name: pd-1

Status: done

submitted: 2018-11-30 01:02:50, status changed: 2018-11-30 01:16:50
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Chain sequence(s) A: AFTVTVPKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDVKLQDAGVYRCMISYGGADYKRITVKVNAPYNKINQRILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTTTTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENHTAELVIPEL
C: GPWRSLTFYPAWLTVSEGANATFTCSLSNWSEDLMLNWNRLSPSNQTEKQAAFSNGLSQPVQDARFQIIQLPNRHDFHMNILDTRRNDSGIYLCGAISLHPKAKIEESPGAELVVTER
B: RSLTFYPAWLTVSEGANATFTCSLSNWSEDLMLNWNRLSPSNQTEKQAAFSNGLSQPVQDARFQIIQLPNRHDFHMNILDTRRNDSGIYLCGAISLHPKAKIEESPGAELVVTERI
Distance of aggregation 10 Å
Dynamic mode No
Show buried residues

Minimal score value
-4.2999
Maximal score value
1.7677
Average score
-0.8245
Total score value
-367.7068

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
18 A A -1.0075
19 F A 0.0000
20 T A -0.4494
21 V A 0.0000
22 T A -1.0026
23 V A -1.0196
24 P A -1.2519
25 K A -1.7416
26 D A -1.3056
27 L A 0.2684
28 Y A 0.4510
29 V A 1.0471
30 V A -0.1395
31 E A -1.4851
32 Y A -1.1613
33 G A -1.8228
34 S A -1.9206
35 N A -2.2627
36 M A 0.0000
37 T A -0.7389
38 I A 0.0000
39 E A -1.2828
40 C A 0.0000
41 K A -1.1548
42 F A 0.0000
43 P A -0.3491
44 V A -0.5235
45 E A -1.5462
46 K A -2.0862
47 Q A -1.3958
48 L A -0.4643
49 D A -0.5850
50 L A -0.2646
51 A A -0.3446
52 A A -0.0869
53 L A 0.0000
54 I A 0.0000
55 V A 0.0000
56 Y A 0.0000
57 W A 0.0000
58 E A 0.0000
59 M A 0.0000
60 E A -2.7764
61 D A -3.3132
62 K A -2.5353
63 N A -1.5442
64 I A 0.0000
65 I A 0.0000
66 Q A 0.0000
67 F A 0.0000
68 V A -0.8776
69 H A -1.4408
70 G A -1.5353
71 E A -2.3101
72 E A -1.8760
73 D A -1.0152
74 L A -0.5375
75 K A -1.2261
76 V A -0.5705
77 Q A -1.0316
78 H A -1.5333
79 S A -1.4233
80 S A -1.3707
81 Y A 0.0000
82 R A -2.8055
83 Q A -2.6142
84 R A -2.4046
85 A A 0.0000
86 R A -2.6216
87 L A 0.0000
88 L A -1.3467
89 K A -2.3456
90 D A -2.1513
91 Q A -1.3040
92 L A 0.0000
93 S A -0.5627
94 L A 0.5148
95 G A 0.0000
96 N A -0.6830
97 A A 0.0000
98 A A 0.0000
99 L A 0.0000
100 Q A -1.3324
101 I A 0.0000
102 T A -2.1642
103 D A -2.6864
104 V A 0.0000
105 K A -2.3694
106 L A 0.0000
107 Q A -2.0945
108 D A 0.0000
109 A A -0.4951
110 G A -0.3819
111 V A 0.4561
112 Y A 0.0000
113 R A -0.4986
114 C A 0.0000
115 M A 0.0000
116 I A 0.0000
117 S A 0.0000
118 Y A 0.0000
119 G A -0.6641
120 G A -0.5365
121 A A 0.0000
122 D A 0.0000
123 Y A 0.0000
124 K A 0.0000
125 R A -0.4508
126 I A 0.0000
127 T A 0.0382
128 V A 0.0000
129 K A -1.0529
130 V A 0.0000
131 N A 0.0000
132 A A 0.0000
133 P A -1.1158
134 Y A 0.0000
135 N A -2.4422
136 K A -2.7971
137 I A -2.1051
138 N A -2.6331
139 Q A -2.4972
140 R A -2.1922
141 I A -0.0493
142 L A 0.7412
143 V A 1.7677
144 V A 0.8642
145 D A 0.2636
146 P A 0.9435
147 V A 1.4234
148 T A 0.3313
149 S A 0.0178
150 E A -0.8510
151 H A -0.3586
152 E A -0.7201
153 L A 0.0000
154 T A -1.5594
155 C A 0.0000
156 Q A -1.5925
157 A A 0.0000
158 E A -1.6966
159 G A 0.0000
160 Y A -0.5832
161 P A -0.9630
162 K A -2.0789
163 A A 0.0000
164 E A -2.5472
165 V A -1.3123
166 I A -0.2318
167 W A 0.0000
168 T A 0.0000
169 S A -0.9335
170 S A -1.3800
171 D A -2.3373
172 H A -1.9675
173 Q A -1.2246
174 V A 0.9213
175 L A 0.3700
176 S A -0.3657
177 G A -1.1583
178 K A -2.2558
179 T A -1.3305
180 T A -0.7829
181 T A -0.9452
182 T A -1.2858
183 N A -2.7677
184 S A 0.0000
185 K A -3.7929
186 R A -3.8154
187 E A -3.8460
188 E A -4.2999
189 K A -3.5401
190 L A 0.0000
191 F A -1.6114
192 N A -1.3766
193 V A 0.0000
194 T A -1.0178
195 S A 0.0000
196 T A -1.4726
197 L A 0.0000
198 R A -2.0304
199 I A -1.1430
200 N A -1.4518
201 T A -1.0376
202 T A -0.9983
203 T A -1.0160
204 N A -1.5717
205 E A -0.7236
206 I A -0.1524
207 F A 0.0000
208 Y A 0.0058
209 C A 0.0000
210 T A -0.8255
211 F A 0.0000
212 R A -2.3865
213 R A 0.0000
214 L A -1.0523
215 D A -1.8890
216 P A -1.4704
217 E A -2.3215
218 E A -1.8878
219 N A -2.0219
220 H A -1.4646
221 T A -1.0024
222 A A -1.2311
223 E A -0.8722
224 L A 0.0000
225 V A 0.1928
226 I A 0.0000
227 P A -0.8229
228 E A -1.3525
229 L A 0.5858
33 R B -2.1040
34 S B -1.4866
35 L B 0.0000
36 T B -0.0373
37 F B 0.0000
38 Y B 1.1641
39 P B 0.9272
40 A B 0.8758
41 W B 1.3368
42 L B 0.9478
43 T B 0.4586
44 V B -0.8501
45 S B -1.6923
46 E B -3.0126
47 G B -2.4637
48 A B -1.6807
49 N B -2.0753
50 A B 0.0000
51 T B -0.2379
52 F B 0.0000
53 T B 0.2181
54 C B 0.0000
55 S B -0.6598
56 L B 0.0000
57 S B -1.4816
58 N B -2.1188
59 W B -2.0720
60 S B -2.0192
61 E B -3.2363
62 D B -3.0217
63 L B 0.0000
64 M B -0.8287
65 L B 0.0000
66 N B 0.0000
67 W B 0.0000
68 N B 0.0000
69 R B -1.1015
70 L B -0.8992
71 S B -0.9895
72 P B -0.7327
73 S B -0.9730
74 N B -1.7284
75 Q B 0.0000
76 T B 0.0000
77 E B -1.7983
78 K B 0.0000
79 Q B -1.0466
80 A B 0.0000
81 A B -0.1557
82 F B 0.0000
83 S B -1.4471
84 N B -2.4158
85 G B -1.3983
86 L B -0.6915
87 S B -0.2853
88 Q B -0.8301
89 P B -0.7829
90 V B -0.8555
91 Q B -1.4750
92 D B -1.2589
93 A B -0.7160
94 R B -1.0552
95 F B 0.0000
96 Q B -0.3496
97 I B 0.0000
98 I B 0.3432
99 Q B -0.8631
100 L B -1.1088
101 P B -1.4705
102 N B -2.4126
103 R B -3.0503
104 H B -2.1675
105 D B -1.4814
106 F B 0.0000
107 H B -0.0774
108 M B 0.0000
109 N B -0.5992
110 I B 0.0000
111 L B -1.4410
112 D B -2.6913
113 T B 0.0000
114 R B -4.0389
115 R B -3.8813
116 N B -2.7057
117 D B 0.0000
118 S B -1.2494
119 G B -0.4346
120 I B -0.0017
121 Y B 0.0000
122 L B 0.0000
123 C B 0.0000
124 G B 0.0000
125 A B 0.0000
126 I B 0.0000
127 S B 0.0000
128 L B -0.9277
129 H B -1.6007
130 P B -1.0595
131 K B -0.9161
132 A B 0.0000
133 K B -1.5970
134 I B 0.0000
135 E B -1.6207
136 E B -0.9270
137 S B 0.0000
138 P B -0.2741
139 G B -0.1602
140 A B 0.0000
141 E B 0.1539
142 L B 0.0000
143 V B -0.1409
144 V B 0.0000
145 T B -1.7174
146 E B -2.8774
147 R B -2.3749
148 I B 0.5621
30 G C -0.5398
31 P C -0.0592
32 W C 0.4513
33 R C -0.4774
34 S C -0.9491
35 L C 0.0000
36 T C -0.2115
37 F C 0.0000
38 Y C 1.1508
39 P C 0.9353
40 A C 0.9188
41 W C 1.4647
42 L C 0.9827
43 T C 0.3818
44 V C -1.2622
45 S C -2.3995
46 E C -3.8485
47 G C -2.9645
48 A C -1.9556
49 N C -2.0365
50 A C 0.0000
51 T C -0.2199
52 F C 0.0000
53 T C 0.2339
54 C C 0.0000
55 S C -0.4958
56 L C 0.0000
57 S C -0.6316
58 N C -1.0101
59 W C -1.4272
60 S C -1.5101
61 E C -2.4600
62 D C -2.3052
63 L C 0.0000
64 M C -0.0361
65 L C 0.0000
66 N C 0.0000
67 W C 0.0000
68 N C 0.0000
69 R C -0.9522
70 L C -0.4633
71 S C -1.0728
72 P C -0.8566
73 S C -1.2609
74 N C -2.1366
75 Q C -2.4409
76 T C -2.0665
77 E C -2.6315
78 K C -1.9426
79 Q C -1.2233
80 A C 0.0000
81 A C -0.0112
82 F C 0.0000
83 S C -1.1974
84 N C -1.9994
85 G C -1.1465
86 L C -0.4063
87 S C -0.0358
88 Q C -0.2534
89 P C -0.3029
90 V C -0.0698
91 Q C -1.0566
92 D C -0.8920
93 A C -0.3750
94 R C -0.8896
95 F C 0.0000
96 Q C -0.1403
97 I C 0.0000
98 I C 0.8317
99 Q C -0.5137
100 L C -0.9390
101 P C -1.5775
102 N C -2.3816
103 R C -2.5279
104 H C -1.9577
105 D C -1.2522
106 F C 0.0000
107 H C 0.0507
108 M C 0.0000
109 N C -0.4656
110 I C 0.0000
111 L C -1.1692
112 D C -2.7119
113 T C 0.0000
114 R C -4.1031
115 R C -3.8917
116 N C -2.8083
117 D C 0.0000
118 S C -1.1396
119 G C -0.2009
120 I C 0.8303
121 Y C 0.0000
122 L C -0.2132
123 C C 0.0000
124 G C 0.0000
125 A C 0.0000
126 I C -0.1998
127 S C -0.5357
128 L C 0.0959
129 H C -1.4673
130 P C -1.3474
131 K C -2.0478
132 A C -0.8708
133 K C -1.5092
134 I C 0.2129
135 E C -1.8203
136 E C -2.3492
137 S C 0.0000
138 P C -0.7203
139 G C -0.0633
140 A C 0.0000
141 E C 0.5588
142 L C 0.0000
143 V C -0.1224
144 V C 0.0000
145 T C -2.4000
146 E C -3.6350
147 R C -3.0647

 

Laboratory of Theory of Biopolymers 2015