Project name: knob and hole [mutate: SB26R]

Status: done

submitted: 2019-04-03 02:34:57, status changed: 2019-04-03 02:47:18
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Chain sequence(s) A: GQPREPQVYTLPPCQEEMTKNQVSLWCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSRLTVDKSRWQEGNVFSCSVMHEALHNHYTQKSLSLS
B: GQPREPQVYTLPPCQEEMTKNQVSLSCAVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLVSRLTVDKSRWQEGNVFSCSVMHEALHNHYTQKSLSLS
Distance of aggregation 5 Å
Dynamic mode No
Mutated residues SB26R
Energy difference between WT (input) and mutated protein (by FoldX) -0.0158841 kcal/mol

Changes in protein stability upon mutation are calculated using the FoldX forcefield. Computational prediction of protein stability is used with the intention of preventing the experimental characterization of proteins bearing mutations that significantly destabilize their structure. Mutations resulting in a predicted reduction in protein stability ≥ 1 kcal/mol are considered disruptive.

Show buried residues

Minimal score value
-2.0938
Maximal score value
1.5744
Average score
-0.394
Total score value
-81.953

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.6876
2 Q A -1.2962
3 P A -0.5094
4 R A -1.7607
5 E A -2.0861
6 P A 0.0000
7 Q A -0.3869
8 V A 0.0000
9 Y A 0.0000
10 T A 0.0000
11 L A 0.0000
12 P A -0.0986
13 P A -0.0353
14 C A -0.1377
15 Q A -1.5132
16 E A -2.0375
17 E A 0.0000
18 M A 0.2373
19 T A -0.3349
20 K A -1.9428
21 N A -1.6976
22 Q A -0.9862
23 V A 0.0000
24 S A 0.0000
25 L A 0.0000
26 W A 0.0000
27 C A 0.0000
28 L A 0.0000
29 V A 0.0000
30 K A -0.2362
31 G A -0.1555
32 F A 0.0000
33 Y A 0.1972
34 P A 0.0100
35 S A -0.4183
36 D A -1.7360
37 I A 0.0481
38 A A 0.0957
39 V A 0.0000
40 E A -1.1094
41 W A 0.0000
42 E A -0.4174
43 S A 0.0000
44 N A -1.3569
45 G A -0.9146
46 Q A -1.3289
47 P A -0.5574
48 E A -0.5054
49 N A -1.4178
50 N A -0.7480
51 Y A 0.0812
52 K A -0.3517
53 T A -0.0945
54 T A 0.0000
55 P A -0.1716
56 P A -0.0746
57 V A 0.4149
58 L A 1.1935
59 D A -0.1529
60 S A -0.5978
61 D A -1.8933
62 G A -0.6879
63 S A -0.0462
64 F A 0.3687
65 F A 0.0000
66 L A 0.0000
67 Y A 0.0000
68 S A 0.0000
69 R A 0.0000
70 L A 0.0000
71 T A -0.0097
72 V A 0.0000
73 D A -1.0619
74 K A -0.7273
75 S A -0.3859
76 R A -0.4676
77 W A 0.0000
78 Q A -1.5245
79 E A -2.0656
80 G A -0.5435
81 N A 0.0081
82 V A 1.4332
83 F A 0.0000
84 S A 0.0000
85 C A 0.0000
86 S A 0.0000
87 V A 0.0000
88 M A 0.3845
89 H A 0.0000
90 E A -1.9200
91 A A -0.4792
92 L A -0.1252
93 H A -1.1882
94 N A -1.6291
95 H A -1.2829
96 Y A 0.4237
97 T A -0.0652
98 Q A -0.9034
99 K A -0.5417
100 S A -0.2373
101 L A 0.1388
102 S A 0.1760
103 L A 0.3826
104 S A -0.1313
1 G B -0.6887
2 Q B -1.3038
3 P B -0.3781
4 R B -0.8189
5 E B -1.9110
6 P B 0.0000
7 Q B -0.5073
8 V B 0.0000
9 Y B 0.0000
10 T B 0.0000
11 L B 0.0000
12 P B -0.0999
13 P B -0.0296
14 C B -0.1396
15 Q B -1.4215
16 E B -1.5354
17 E B 0.0000
18 M B 0.1999
19 T B -0.3171
20 K B -1.8293
21 N B -1.7603
22 Q B -1.5374
23 V B 0.0000
24 S B 0.0000
25 L B 0.0000
26 R B 0.0000 mutated: SB26R
27 C B 0.0000
28 A B 0.0000
29 V B 0.0000
30 K B -0.2666
31 G B -0.1089
32 F B 0.0000
33 Y B 0.2468
34 P B 0.0146
35 S B -0.4020
36 D B -1.7329
37 I B 0.0459
38 A B 0.1381
39 V B 0.0000
40 E B -1.1810
41 W B 0.0000
42 E B -0.5188
43 S B -0.3370
44 N B -1.3611
45 G B -0.9133
46 Q B -1.3294
47 P B -0.5840
48 E B -0.5649
49 N B -1.5031
50 N B -1.2069
51 Y B -0.0591
52 K B -0.7709
53 T B -0.1705
54 T B 0.0000
55 P B -0.1765
56 P B -0.0880
57 V B 0.4805
58 L B 1.5744
59 D B 0.0144
60 S B -0.5827
61 D B -1.8989
62 G B -0.7130
63 S B 0.0000
64 F B 0.4285
65 F B 0.0000
66 L B 0.0000
67 V B 0.0000
68 S B 0.0000
69 R B 0.0000
70 L B 0.0000
71 T B -0.0098
72 V B 0.0000
73 D B -1.8555
74 K B -0.7763
75 S B -0.5149
76 R B -1.2668
77 W B 0.0000
78 Q B -1.5647
79 E B -2.0938
80 G B -0.7876
81 N B -0.0302
82 V B 1.1514
83 F B 0.0000
84 S B 0.0000
85 C B 0.0000
86 S B 0.0000
87 V B 0.0000
88 M B 0.4901
89 H B 0.0000
90 E B -1.6815
91 A B -0.4691
92 L B -0.1371
93 H B -1.1891
94 N B -1.6280
95 H B -1.1001
96 Y B 0.4019
97 T B -0.0721
98 Q B -0.9815
99 K B -0.8275
100 S B -0.3005
101 L B 0.0000
102 S B 0.1937
103 L B 0.9147
104 S B -0.0354

 

Laboratory of Theory of Biopolymers 2015