Project name: GALNT2 mutation L421P [mutate: LA421P]

Status: done

submitted: 2018-12-14 10:56:54, status changed: 2018-12-14 11:18:57
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Chain sequence(s) A: KVRWPDFNQEAYVGGTMVRSGQDPYARNKFNQVESDKLRMDRAIPDTRHDQCQRKQWRVDLPATSVVITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGALLGKIEKVRVLRNDRREGLMRSRVRGADAAQAKVLTFLDSHCECNEHWLEPLLERVAEDRTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDYMTPEQRRSRQGNPVAPIKTPMIAGGLFVMDKFYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVFRKQHPYTFPGGSGTVFARNTRRAAEVWMDEYKNFYYAAVPSARNVPYGNIQSRLELRKKLSCKPFKWYLENVYPELRVPDHQDIAFGALQQGTNCLDTLGHFADGVVGVYECHNAGGNQEWALTKEKSVKHMDLCLTVVDRAPGSLIKLQGCRENDSRQKWEQIEGNSKLRHVGSNLCLDSRTAKSGGLSVEVCGPALSQQWKFTLN
P: STTPAPTTK
Distance of aggregation 10 Å
Dynamic mode No
Mutated residues LA421P
Energy difference between WT (input) and mutated protein (by FoldX) 5.40369 kcal/mol

CAUTION: Your mutation/s can destabilize the protein structure

Changes in protein stability upon mutation are calculated using the FoldX forcefield. Computational prediction of protein stability is used with the intention of preventing the experimental characterization of proteins bearing mutations that significantly destabilize their structure. Mutations resulting in a predicted reduction in protein stability ≥ 1 kcal/mol are considered disruptive.

Show buried residues

Minimal score value
-3.7323
Maximal score value
1.0314
Average score
-0.8151
Total score value
-410.008

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
75 K A -2.7471
76 V A -2.6931
77 R A -3.0452
78 W A -2.3399
79 P A -1.9592
80 D A -2.7204
81 F A 0.0000
82 N A -2.3902
83 Q A -2.2688
84 E A -2.6850
85 A A -1.5008
86 Y A 0.0000
87 V A 0.0000
88 G A -1.0530
89 G A -0.6766
90 T A -0.2017
91 M A 0.0990
92 V A -0.9470
93 R A -2.1039
94 S A -1.6330
95 G A -1.7128
96 Q A -2.2231
97 D A -2.5451
98 P A -1.4298
99 Y A -0.9526
100 A A -1.3285
101 R A -1.8853
102 N A 0.0000
103 K A -1.6584
104 F A 0.0000
105 N A -1.0683
106 Q A 0.0000
107 V A -0.3109
108 E A -1.3134
109 S A 0.0000
110 D A -1.1623
111 K A -2.0171
112 L A -1.5339
113 R A -2.4823
114 M A -1.3534
115 D A -1.0682
116 R A -0.7997
117 A A -0.4334
118 I A -0.5716
119 P A -1.1621
120 D A -2.4998
121 T A -1.7053
122 R A -2.1331
123 H A -2.2178
124 D A -3.3455
125 Q A -2.9377
126 C A 0.0000
127 Q A -3.5332
128 R A -3.6152
129 K A -2.9061
130 Q A -2.0447
131 W A -0.6748
132 R A -0.7713
133 V A 0.4454
134 D A -1.1379
135 L A 0.0000
136 P A -0.8330
137 A A -1.2147
138 T A 0.0000
139 S A 0.0000
140 V A 0.0000
141 V A 0.0000
142 I A 0.0000
143 T A -0.2711
144 F A 0.0000
145 H A -0.4937
146 N A -1.0923
147 E A 0.0000
148 A A 0.0000
149 R A 0.0000
150 S A 0.0000
151 A A 0.0000
152 L A 0.0000
153 L A 0.0000
154 R A 0.0000
155 T A 0.0000
156 V A 0.0000
157 V A 0.0000
158 S A 0.0000
159 V A 0.0000
160 L A -0.9537
161 K A -1.5993
162 K A -1.4564
163 S A 0.0000
164 P A -0.8007
165 P A -1.2541
166 H A -1.4173
167 L A 0.0000
168 I A 0.0000
169 K A -2.0541
170 E A 0.0000
171 I A 0.0000
172 I A 0.0000
173 L A 0.0000
174 V A 0.0000
175 D A 0.0000
176 D A 0.0000
177 Y A -0.9741
178 S A 0.0000
179 N A -1.9021
180 D A -2.1354
181 P A -1.5833
182 E A -1.8964
183 D A -1.3626
184 G A 0.0000
185 A A -0.7804
186 L A -0.3952
187 L A 0.0000
188 G A -1.2535
189 K A -2.4918
190 I A 0.0000
191 E A -2.0401
192 K A -1.8572
193 V A 0.0000
194 R A -0.7602
195 V A -0.0584
196 L A -0.1741
197 R A -0.9245
198 N A 0.0000
199 D A -2.6833
200 R A -2.7405
201 R A -1.5545
202 E A -1.3524
203 G A 0.0000
204 L A -0.2414
205 M A 0.0000
206 R A -0.5641
207 S A 0.0000
208 R A -0.7931
209 V A -1.0623
210 R A -1.4648
211 G A 0.0000
212 A A 0.0000
213 D A -2.4053
214 A A -1.3183
215 A A 0.0000
216 Q A -1.9374
217 A A 0.0000
218 K A -0.9871
219 V A 0.0000
220 L A 0.0000
221 T A 0.0000
222 F A 0.0000
223 L A 0.0000
224 D A -0.5448
225 S A 0.0000
226 H A 0.0000
227 C A 0.0000
228 E A 0.0000
229 C A 0.0000
230 N A 0.0000
231 E A -2.4813
232 H A -1.6390
233 W A 0.0000
234 L A 0.0000
235 E A 0.0000
236 P A -0.5818
237 L A 0.0000
238 L A 0.0000
239 E A -1.1706
240 R A -1.4056
241 V A 0.0000
242 A A -1.9444
243 E A -2.7066
244 D A -2.4298
245 R A -2.0940
246 T A -1.2087
247 R A -1.4071
248 V A 0.0000
249 V A 0.0000
250 S A 0.0000
251 P A 0.0000
252 I A 0.0000
253 I A 0.0000
254 D A 0.0000
255 V A -0.0185
256 I A 0.0000
257 N A -1.6643
258 M A -1.6058
259 D A -2.0246
260 N A -2.4774
261 F A 0.0000
262 Q A -1.7839
263 Y A 0.0000
264 V A -0.3301
265 G A 0.0000
266 A A 0.0000
267 S A -0.7845
268 A A -0.7008
269 D A -0.7855
270 L A 0.0000
271 K A -0.5650
272 G A 0.0000
273 G A 0.0000
274 F A 0.0000
275 D A -1.3929
276 W A 0.0000
277 N A -0.4850
278 L A 0.0000
279 V A -0.0689
280 F A 0.0000
281 K A -1.0213
282 W A -0.4426
283 D A -0.4387
284 Y A 0.4758
285 M A 0.0000
286 T A -1.2572
287 P A -1.8176
288 E A -3.0534
289 Q A -2.3566
290 R A -2.8166
291 R A -3.6335
292 S A -2.6254
293 R A -2.4871
294 Q A -2.5671
295 G A -1.7264
296 N A -1.4105
297 P A -1.7170
298 V A 0.0000
299 A A -0.6889
300 P A -0.5240
301 I A 0.0000
302 K A -1.3310
303 T A 0.0000
304 P A 0.0000
305 M A 0.0000
306 I A 0.0000
307 A A 0.0000
308 G A 0.0000
309 G A -0.2730
310 L A 0.0000
311 F A 0.0000
312 V A 0.0000
313 M A 0.0000
314 D A 0.0000
315 K A -0.6291
316 F A 0.6306
317 Y A 0.0000
318 F A 0.0000
319 E A -1.4547
320 E A -1.7970
321 L A 0.0000
322 G A -0.9363
323 K A -1.1804
324 Y A 0.0000
325 D A 0.0000
326 M A 0.4781
327 M A 0.5450
328 M A 0.0000
329 D A -0.2235
330 V A 0.0000
331 W A 0.1893
332 G A 0.0000
333 G A 0.0000
334 E A 0.0000
335 N A -0.0756
336 L A 0.0000
337 E A 0.0000
338 I A 0.0000
339 S A 0.0000
340 F A 0.0000
341 R A 0.0000
342 V A 0.0000
343 W A 0.0000
344 Q A 0.0000
345 C A -0.8092
346 G A -0.6257
347 G A 0.0000
348 S A -0.6680
349 L A 0.0000
350 E A 0.0000
351 I A 0.0000
352 I A 0.0000
353 P A 0.0000
354 C A 0.0000
355 S A 0.0000
356 R A 0.0000
357 V A 0.0000
358 G A 0.0000
359 H A 0.0000
360 V A 0.0000
361 F A 0.0000
362 R A -1.7176
363 K A -2.4473
364 Q A -2.0822
365 H A -1.2442
366 P A -1.0344
367 Y A -0.3753
368 T A -0.1073
369 F A -0.2299
370 P A -0.5373
371 G A -0.7566
372 G A -0.6243
373 S A -0.5097
374 G A -0.7028
375 T A -0.7780
376 V A 0.0000
377 F A -0.1177
378 A A 0.0000
379 R A -1.1282
380 N A 0.0000
381 T A 0.0000
382 R A -0.7800
383 R A 0.0000
384 A A 0.0000
385 A A 0.0000
386 E A -0.7903
387 V A 0.0000
388 W A 0.0000
389 M A 0.0000
390 D A -1.8931
391 E A -2.5669
392 Y A -1.3936
393 K A -1.4478
394 N A -1.7635
395 F A -0.9759
396 Y A 0.0000
397 Y A -0.7837
398 A A -0.6705
399 A A -0.1774
400 V A -0.1507
401 P A -0.6959
402 S A -1.0084
403 A A 0.0000
404 R A -2.3029
405 N A -2.1571
406 V A 0.0000
407 P A -1.1437
408 Y A -0.9277
409 G A -1.1843
410 N A -1.6937
411 I A 0.0000
412 Q A -2.0633
413 S A -1.6514
414 R A 0.0000
415 L A -1.7572
416 E A -3.0762
417 L A -2.2881
418 R A -2.2716
419 K A -3.3071
420 K A -3.0418
421 P A -2.1937 mutated: LA421P
422 S A -1.8515
423 C A -1.2810
424 K A -1.4710
425 P A -1.3293
426 F A 0.0000
427 K A -2.6907
428 W A -1.8073
429 Y A 0.0000
430 L A 0.0000
431 E A -3.0028
432 N A -2.4462
433 V A -1.4976
434 Y A 0.0000
435 P A -2.1953
436 E A -2.1693
437 L A -1.6879
438 R A -2.1499
439 V A -0.8374
440 P A -1.3870
441 D A -2.8479
442 H A -2.6859
443 Q A -2.7877
444 D A -2.3430
445 I A -0.3960
446 A A 0.4047
447 F A 0.7380
448 G A 0.0000
449 A A -0.6588
450 L A 0.0000
451 Q A -1.1087
452 Q A 0.0000
453 G A -1.0171
454 T A -0.8409
455 N A -0.8825
456 C A 0.0000
457 L A 0.0000
458 D A 0.0000
459 T A 0.0000
460 L A 0.7710
461 G A -0.0975
462 H A 0.1545
463 F A 1.0314
464 A A -0.2764
465 D A -1.3978
466 G A -0.3806
467 V A 0.0191
468 V A 0.0000
469 G A 0.0000
470 V A 0.4897
471 Y A 0.4969
472 E A -1.4813
473 C A -1.2452
474 H A -1.5943
475 N A -2.1397
476 A A -1.2956
477 G A -1.3426
478 G A -1.2187
479 N A -0.8583
480 Q A 0.0000
481 E A -0.8932
482 W A 0.0000
483 A A 0.0000
484 L A -0.4936
485 T A -1.4270
486 K A -2.6563
487 E A -3.7323
488 K A -2.6310
489 S A -1.8951
490 V A 0.0000
491 K A -0.4982
492 H A 0.0000
493 M A -0.1033
494 D A -1.2563
495 L A 0.0000
496 C A 0.0000
497 L A 0.0000
498 T A 0.0000
499 V A 0.0000
500 V A -0.6513
501 D A -1.8680
502 R A -2.2755
503 A A -1.1043
504 P A -0.8289
505 G A -0.6881
506 S A -0.7243
507 L A -0.1243
508 I A 0.0000
509 K A -0.5313
510 L A 0.0000
511 Q A -0.6999
512 G A -0.9286
513 C A -1.4577
514 R A -2.8551
515 E A -3.5459
516 N A -2.9428
517 D A -1.9778
518 S A -1.5046
519 R A -1.3526
520 Q A 0.0000
521 K A -1.5295
522 W A 0.0000
523 E A -1.0508
524 Q A -2.0090
525 I A -1.9242
526 E A -2.6905
527 G A -2.2888
528 N A -2.8002
529 S A -2.3486
530 K A -1.8272
531 L A 0.0000
532 R A -1.1016
533 H A 0.0000
534 V A -0.5609
535 G A -0.7411
536 S A -0.9072
537 N A -1.2894
538 L A 0.0000
539 C A 0.0000
540 L A 0.0000
541 D A 0.0000
542 S A -0.7959
543 R A -1.6191
544 T A -1.3680
545 A A -1.0922
546 K A -2.1035
547 S A -1.3532
548 G A -0.8919
549 G A 0.0000
550 L A 0.0000
551 S A 0.0000
552 V A 0.0000
553 E A -0.4202
554 V A 0.3705
555 C A 0.0453
556 G A 0.0642
557 P A 0.1080
558 A A 0.2965
559 L A 0.9566
560 S A -0.0813
561 Q A 0.0000
562 Q A -1.2120
563 W A 0.0000
564 K A -2.1461
565 F A -0.4417
566 T A 0.1838
567 L A 0.9891
568 N A -0.6005
5 S P -0.8574
6 T P -0.9493
7 T P -0.6390
8 P P -0.6268
9 A P -0.4309
10 P P 0.0000
11 T P -0.3725
12 T P -0.7837
13 K P -1.7160

 

Laboratory of Theory of Biopolymers 2015