Project name: Tau PHF [mutate: VB309K, VJ309K]

Status: done

submitted: 2019-02-24 12:03:52, status changed: 2019-02-24 12:45:47
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Chain sequence(s) A: VQIVYKPVDLSKVTSKCGSLGNIHHKPGGGQVEVKSEKLDFKDRVQSKIGSLDNITHVPGGGNKKIETHKLTF
C: VQIVYKPVDLSKVTSKCGSLGNIHHKPGGGQVEVKSEKLDFKDRVQSKIGSLDNITHVPGGGNKKIETHKLTF
B: VQIVYKPVDLSKVTSKCGSLGNIHHKPGGGQVEVKSEKLDFKDRVQSKIGSLDNITHVPGGGNKKIETHKLTF
E: VQIVYKPVDLSKVTSKCGSLGNIHHKPGGGQVEVKSEKLDFKDRVQSKIGSLDNITHVPGGGNKKIETHKLTF
D: VQIVYKPVDLSKVTSKCGSLGNIHHKPGGGQVEVKSEKLDFKDRVQSKIGSLDNITHVPGGGNKKIETHKLTF
G: VQIVYKPVDLSKVTSKCGSLGNIHHKPGGGQVEVKSEKLDFKDRVQSKIGSLDNITHVPGGGNKKIETHKLTF
F: VQIVYKPVDLSKVTSKCGSLGNIHHKPGGGQVEVKSEKLDFKDRVQSKIGSLDNITHVPGGGNKKIETHKLTF
I: VQIVYKPVDLSKVTSKCGSLGNIHHKPGGGQVEVKSEKLDFKDRVQSKIGSLDNITHVPGGGNKKIETHKLTF
H: VQIVYKPVDLSKVTSKCGSLGNIHHKPGGGQVEVKSEKLDFKDRVQSKIGSLDNITHVPGGGNKKIETHKLTF
J: VQIVYKPVDLSKVTSKCGSLGNIHHKPGGGQVEVKSEKLDFKDRVQSKIGSLDNITHVPGGGNKKIETHKLTF
Distance of aggregation 10 Å
Dynamic mode No
Mutated residues VB309K, VJ309K
Energy difference between WT (input) and mutated protein (by FoldX) 1.06054 kcal/mol

CAUTION: Your mutation/s can destabilize the protein structure

Changes in protein stability upon mutation are calculated using the FoldX forcefield. Computational prediction of protein stability is used with the intention of preventing the experimental characterization of proteins bearing mutations that significantly destabilize their structure. Mutations resulting in a predicted reduction in protein stability ≥ 1 kcal/mol are considered disruptive.

Show buried residues

Minimal score value
-5.5338
Maximal score value
2.7204
Average score
-0.7927
Total score value
-578.6838

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
306 V A 1.9555
307 Q A 0.5729
308 I A 1.4477
309 V A 1.2485
310 Y A 0.3223
311 K A -1.2171
312 P A -0.2957
313 V A 0.8835
314 D A -0.1854
315 L A 0.8726
316 S A -0.6275
317 K A -1.5264
318 V A -1.0572
319 T A -1.3440
320 S A -1.5815
321 K A -2.4669
322 C A -1.1728
323 G A -1.0682
324 S A -0.6347
325 L A -0.0103
326 G A -0.7593
327 N A -1.5295
328 I A -0.5644
329 H A -1.1927
330 H A -0.6576
331 K A -1.3736
332 P A -0.9085
333 G A -1.0356
334 G A -0.9906
335 G A -1.0636
336 Q A -1.6815
337 V A -1.0892
338 E A -2.2783
339 V A -1.6261
340 K A -2.9809
341 S A -2.6608
342 E A -3.6299
343 K A -3.4388
344 L A -1.8901
345 D A -2.7059
346 F A -2.7347
347 K A -3.7998
348 D A -3.5617
349 R A -3.8950
350 V A -2.5359
351 Q A -2.7135
352 S A -1.6013
353 K A -2.1089
354 I A -1.0212
355 G A -1.0068
356 S A -0.8195
357 L A -0.1850
358 D A -0.2069
359 N A 0.1093
360 I A 1.2266
361 T A 0.0000
362 H A -0.5056
363 V A -0.0602
364 P A -0.3903
365 G A 0.0000
366 G A -1.2023
367 G A -1.1256
368 N A -1.5800
369 K A -2.3294
370 K A -1.3166
371 I A 0.0879
372 E A -0.5217
373 T A -0.6509
374 H A -1.1901
375 K A -2.0610
376 L A -0.3171
377 T A 0.5385
378 F A 1.8382
306 V B 1.9565
307 Q B -0.2654
308 I B -0.2576
309 K B -2.2207 mutated: VB309K
310 Y B -1.4256
311 K B -2.0965
312 P B -0.7710
313 V B 0.6982
314 D B -0.0689
315 L B 0.9216
316 S B -0.6301
317 K B -1.6853
318 V B -1.1355
319 T B -1.3486
320 S B -1.4750
321 K B -2.3735
322 C B -1.0587
323 G B -0.9609
324 S B -0.5204
325 L B 0.1989
326 G B -0.6403
327 N B -1.4710
328 I B -0.6376
329 H B -1.1864
330 H B -0.7720
331 K B -1.1436
332 P B -0.9201
333 G B -0.9181
334 G B -0.7107
335 G B -0.6223
336 Q B -0.8812
337 V B -0.7732
338 E B -2.1690
339 V B -1.5505
340 K B -2.9355
341 S B -2.6097
342 E B -3.6509
343 K B -3.5503
344 L B -1.9797
345 D B -2.8340
346 F B -2.8121
347 K B -3.9590
348 D B -3.6869
349 R B -3.9749
350 V B -2.5944
351 Q B -2.7512
352 S B -1.5863
353 K B -2.1014
354 I B -0.9877
355 G B -0.9369
356 S B -0.8073
357 L B -0.0874
358 D B -0.4131
359 N B -0.0721
360 I B 1.1311
361 T B 0.0000
362 H B -0.4408
363 V B -0.0252
364 P B -0.3522
365 G B 0.0000
366 G B -1.1678
367 G B -1.0793
368 N B -1.4898
369 K B -2.1608
370 K B -1.2147
371 I B 0.0962
372 E B -0.6763
373 T B -0.7048
374 H B 0.0000
375 K B -2.0837
376 L B -0.3216
377 T B 0.5162
378 F B 1.8227
306 V C 2.5280
307 Q C 1.0577
308 I C 0.0000
309 V C 0.1862
310 Y C 0.0000
311 K C -1.0145
312 P C 0.0000
313 V C 0.5544
314 D C 0.6286
315 L C 0.8216
316 S C 0.0000
317 K C -1.0948
318 V C 0.0000
319 T C -1.6050
320 S C 0.0000
321 K C -2.9884
322 C C 0.0000
323 G C -1.2810
324 S C -0.6819
325 L C 0.0000
326 G C -0.9326
327 N C -1.5325
328 I C 0.0000
329 H C -0.9910
330 H C 0.0000
331 K C 0.0000
332 P C 0.0000
333 G C 0.0000
334 G C 0.0000
335 G C 0.0000
336 Q C 0.0000
337 V C 0.0000
338 E C -1.5413
339 V C 0.0000
340 K C -2.7293
341 S C -2.8548
342 E C -3.4007
343 K C -3.3956
344 L C 0.0000
345 D C -2.7416
346 F C 0.0000
347 K C -3.8571
348 D C -3.9240
349 R C -4.7751
350 V C 0.0000
351 Q C -2.8215
352 S C -1.5141
353 K C -1.3960
354 I C 0.0000
355 G C 0.0000
356 S C 0.0000
357 L C 0.0000
358 D C 0.0000
359 N C 0.0000
360 I C 0.5555
361 T C 0.0000
362 H C -0.2889
363 V C 0.0000
364 P C 0.0000
365 G C 0.0000
366 G C 0.0000
367 G C -1.0153
368 N C 0.0000
369 K C -1.9686
370 K C 0.0000
371 I C 0.0207
372 E C 0.0000
373 T C -0.4873
374 H C 0.0000
375 K C -1.6294
376 L C 0.0000
377 T C 0.5953
378 F C 1.9244
306 V D 2.5366
307 Q D 0.5885
308 I D 0.0000
309 V D -1.0876
310 Y D 0.0000
311 K D -1.5821
312 P D 0.0000
313 V D 0.3620
314 D D 0.0000
315 L D 0.9108
316 S D 0.0000
317 K D -1.5779
318 V D 0.0000
319 T D -1.7230
320 S D 0.0000
321 K D -2.7010
322 C D 0.0000
323 G D -1.1908
324 S D -0.5605
325 L D 0.0000
326 G D -0.8210
327 N D -1.4244
328 I D 0.0000
329 H D -0.9941
330 H D 0.0000
331 K D 0.0000
332 P D 0.0000
333 G D 0.0000
334 G D 0.0000
335 G D 0.0000
336 Q D 0.0000
337 V D 0.0000
338 E D -1.5158
339 V D 0.0000
340 K D -2.7397
341 S D 0.0000
342 E D -3.5881
343 K D -3.7330
344 L D 0.0000
345 D D -3.1226
346 F D 0.0000
347 K D -4.3358
348 D D -4.2718
349 R D -5.0402
350 V D 0.0000
351 Q D -2.9474
352 S D 0.0000
353 K D -1.3808
354 I D 0.0000
355 G D 0.0000
356 S D 0.0000
357 L D 0.0000
358 D D 0.0000
359 N D 0.0000
360 I D 0.5032
361 T D 0.0000
362 H D -0.3050
363 V D 0.0000
364 P D 0.0000
365 G D 0.0000
366 G D 0.0000
367 G D -0.9410
368 N D 0.0000
369 K D -1.6577
370 K D 0.0000
371 I D 0.0097
372 E D 0.0000
373 T D -0.5564
374 H D 0.0000
375 K D -1.7575
376 L D 0.0000
377 T D 0.5661
378 F D 2.0011
306 V E 2.6839
307 Q E 0.7539
308 I E 0.0000
309 V E -0.0659
310 Y E 0.0000
311 K E -1.3931
312 P E 0.0000
313 V E 0.6643
314 D E 0.0000
315 L E 1.1669
316 S E 0.0000
317 K E -1.2844
318 V E 0.0000
319 T E 0.0000
320 S E 0.0000
321 K E -2.6539
322 C E 0.0000
323 G E -1.3017
324 S E -0.6617
325 L E 0.0000
326 G E -1.0332
327 N E -1.5696
328 I E 0.0000
329 H E -0.7281
330 H E 0.0000
331 K E 0.0000
332 P E 0.0000
333 G E 0.0000
334 G E 0.0000
335 G E 0.0000
336 Q E 0.0000
337 V E 0.0000
338 E E -0.9899
339 V E 0.0000
340 K E -2.0725
341 S E -2.5936
342 E E -3.1136
343 K E -2.9996
344 L E 0.0000
345 D E -2.6310
346 F E 0.0000
347 K E -3.7038
348 D E -4.0107
349 R E -4.8034
350 V E 0.0000
351 Q E -2.5398
352 S E 0.0000
353 K E -1.1262
354 I E 0.0000
355 G E 0.0000
356 S E 0.0000
357 L E 0.0000
358 D E 0.0000
359 N E 0.0000
360 I E 0.5078
361 T E 0.0000
362 H E -0.4825
363 V E 0.0000
364 P E 0.0000
365 G E 0.0000
366 G E 0.0000
367 G E -0.6936
368 N E 0.0000
369 K E -1.8250
370 K E 0.0000
371 I E 0.2940
372 E E 0.0000
373 T E -0.3005
374 H E 0.0000
375 K E -1.4028
376 L E 0.0000
377 T E 0.5647
378 F E 1.7563
306 V F 2.7204
307 Q F 0.8145
308 I F 0.0000
309 V F -0.3514
310 Y F 0.0000
311 K F -1.2592
312 P F 0.0000
313 V F 0.6455
314 D F 0.0000
315 L F 1.1881
316 S F 0.0000
317 K F -1.5468
318 V F 0.0000
319 T F 0.0000
320 S F 0.0000
321 K F -2.7846
322 C F 0.0000
323 G F -1.2909
324 S F -0.7194
325 L F 0.0000
326 G F -1.0487
327 N F -1.5857
328 I F 0.0000
329 H F -0.7528
330 H F 0.0000
331 K F 0.0000
332 P F 0.0000
333 G F 0.0000
334 G F 0.0000
335 G F 0.0000
336 Q F 0.0000
337 V F 0.0000
338 E F -0.9779
339 V F 0.0000
340 K F -2.3889
341 S F -2.8426
342 E F -3.4321
343 K F -3.2866
344 L F 0.0000
345 D F -3.0284
346 F F 0.0000
347 K F -4.5605
348 D F -4.8561
349 R F -5.2988
350 V F 0.0000
351 Q F -2.6393
352 S F 0.0000
353 K F -1.0560
354 I F 0.0000
355 G F 0.0000
356 S F 0.0000
357 L F 0.0000
358 D F 0.0000
359 N F 0.0000
360 I F 0.5142
361 T F 0.0000
362 H F -0.4676
363 V F 0.0000
364 P F 0.0000
365 G F 0.0000
366 G F 0.0000
367 G F -0.6676
368 N F 0.0000
369 K F -1.7624
370 K F 0.0000
371 I F 0.3179
372 E F 0.0000
373 T F -0.3480
374 H F 0.0000
375 K F -1.6546
376 L F 0.0000
377 T F 0.5810
378 F F 1.9183
306 V G 2.6306
307 Q G 1.0048
308 I G 0.0000
309 V G -0.2701
310 Y G 0.0000
311 K G -1.4857
312 P G 0.0000
313 V G 0.3075
314 D G 0.0000
315 L G 0.6229
316 S G 0.0000
317 K G -1.1171
318 V G 0.0000
319 T G -1.3303
320 S G 0.0000
321 K G -2.6116
322 C G 0.0000
323 G G -1.1597
324 S G -0.7092
325 L G 0.0000
326 G G -1.0538
327 N G -1.4101
328 I G 0.0000
329 H G -0.8263
330 H G 0.0000
331 K G 0.0000
332 P G 0.0000
333 G G 0.0000
334 G G 0.0000
335 G G 0.0000
336 Q G 0.0000
337 V G 0.0000
338 E G -1.2213
339 V G 0.0000
340 K G -2.6665
341 S G -3.0648
342 E G -3.9291
343 K G -3.6798
344 L G 0.0000
345 D G -2.6227
346 F G 0.0000
347 K G -3.8936
348 D G -3.9466
349 R G -5.0409
350 V G 0.0000
351 Q G -2.7558
352 S G 0.0000
353 K G -1.1505
354 I G 0.0000
355 G G 0.0000
356 S G 0.0000
357 L G 0.0000
358 D G -0.6573
359 N G 0.0000
360 I G -0.1267
361 T G 0.0000
362 H G -0.4490
363 V G 0.0000
364 P G 0.0000
365 G G 0.0000
366 G G 0.0000
367 G G -0.9317
368 N G 0.0000
369 K G -2.2504
370 K G 0.0000
371 I G -0.4985
372 E G 0.0000
373 T G -0.8110
374 H G 0.0000
375 K G -1.7377
376 L G 0.0000
377 T G 0.8296
378 F G 2.1134
306 V H 2.7085
307 Q H 0.9854
308 I H 0.0000
309 V H -0.4072
310 Y H 0.0000
311 K H -0.9259
312 P H 0.0000
313 V H 0.7596
314 D H 0.0000
315 L H 0.9079
316 S H 0.0000
317 K H -1.1766
318 V H 0.0000
319 T H -1.3385
320 S H 0.0000
321 K H -2.4582
322 C H 0.0000
323 G H -1.2524
324 S H -0.7477
325 L H 0.0000
326 G H -1.1770
327 N H -1.6268
328 I H 0.0000
329 H H -1.0718
330 H H 0.0000
331 K H -1.1027
332 P H 0.0000
333 G H 0.0000
334 G H 0.0000
335 G H 0.0000
336 Q H 0.0000
337 V H 0.0000
338 E H -0.8749
339 V H 0.0000
340 K H -2.5989
341 S H 0.0000
342 E H -3.7298
343 K H -3.4947
344 L H 0.0000
345 D H -2.6750
346 F H 0.0000
347 K H -4.5962
348 D H -4.8252
349 R H -5.5338
350 V H 0.0000
351 Q H -2.8074
352 S H -1.1768
353 K H -0.8286
354 I H 0.0000
355 G H 0.0000
356 S H 0.0000
357 L H 0.0000
358 D H 0.0000
359 N H 0.0000
360 I H -0.1195
361 T H 0.0000
362 H H -0.3947
363 V H 0.0000
364 P H 0.0000
365 G H 0.0000
366 G H 0.0000
367 G H -0.9552
368 N H 0.0000
369 K H -2.2874
370 K H 0.0000
371 I H -0.5423
372 E H 0.0000
373 T H -0.6849
374 H H 0.0000
375 K H -1.7908
376 L H 0.0000
377 T H 0.8488
378 F H 2.4241
306 V I 2.0460
307 Q I 0.3505
308 I I 1.1156
309 V I -0.0777
310 Y I -0.1336
311 K I -1.6244
312 P I -0.9393
313 V I 0.4508
314 D I -0.4141
315 L I 0.6588
316 S I -0.8077
317 K I -1.5535
318 V I -1.4399
319 T I -1.2254
320 S I -1.3936
321 K I -2.0839
322 C I -1.2773
323 G I -1.1171
324 S I -0.8204
325 L I -0.4834
326 G I -1.2448
327 N I -1.6445
328 I I -0.7508
329 H I -0.9098
330 H I -0.5135
331 K I -0.8812
332 P I -0.5906
333 G I 0.0000
334 G I -0.6124
335 G I 0.0000
336 Q I -0.6808
337 V I -0.4263
338 E I -1.5234
339 V I -1.4021
340 K I -2.9993
341 S I -3.2575
342 E I -3.8600
343 K I -3.6993
344 L I -2.4927
345 D I -2.5099
346 F I -1.9421
347 K I -3.7481
348 D I -4.2205
349 R I -4.3480
350 V I -3.0017
351 Q I -2.6654
352 S I -1.4132
353 K I -1.7222
354 I I -0.2062
355 G I -0.6459
356 S I -0.7546
357 L I -0.4353
358 D I -1.6391
359 N I -1.0596
360 I I -0.1227
361 T I -0.2131
362 H I -0.8014
363 V I -0.1403
364 P I -0.4919
365 G I -0.7866
366 G I -0.8018
367 G I -1.0241
368 N I -2.0827
369 K I -2.9143
370 K I -2.6790
371 I I -1.1082
372 E I -1.2448
373 T I -1.1445
374 H I -1.9796
375 K I -2.1706
376 L I -0.0386
377 T I 0.9985
378 F I 2.5011
306 V J 2.1451
307 Q J 0.3195
308 I J 0.8882
309 K J -0.6909 mutated: VJ309K
310 Y J -0.1959
311 K J -1.0454
312 P J -0.2903
313 V J 1.2361
314 D J 0.3129
315 L J 1.1819
316 S J -0.4680
317 K J -1.1691
318 V J -1.2708
319 T J -1.1224
320 S J -1.3471
321 K J -2.1876
322 C J -1.3011
323 G J -1.1515
324 S J -0.8972
325 L J -0.6045
326 G J -1.3502
327 N J -1.7424
328 I J -0.7989
329 H J -1.2153
330 H J -1.0616
331 K J -1.9749
332 P J -1.2382
333 G J -0.8357
334 G J -0.8989
335 G J -0.3380
336 Q J -0.4279
337 V J -0.0019
338 E J -0.6537
339 V J -0.8647
340 K J -2.6680
341 S J -2.9650
342 E J -3.5547
343 K J -3.1940
344 L J -2.2956
345 D J -2.5286
346 F J -2.2271
347 K J -4.0638
348 D J -4.5922
349 R J -4.6233
350 V J -3.2361
351 Q J -2.5688
352 S J -1.0522
353 K J -0.8323
354 I J 0.3381
355 G J -0.0275
356 S J -0.1356
357 L J 0.0615
358 D J -1.3916
359 N J -1.1274
360 I J -0.1316
361 T J -0.2224
362 H J -0.7555
363 V J -0.0208
364 P J -0.4344
365 G J -0.7919
366 G J -0.8275
367 G J -1.0273
368 N J -2.1652
369 K J -2.9929
370 K J -2.7419
371 I J -1.1297
372 E J -1.0076
373 T J -0.8740
374 H J -1.4604
375 K J -2.1562
376 L J -0.2583
377 T J 0.9035
378 F J 2.5761

 

Laboratory of Theory of Biopolymers 2015