Project name: YfaU trimer

Status: done

submitted: 2018-10-30 21:14:15, status changed: 2018-10-30 21:28:51
Settings
Chain sequence(s) A: MNALLSNPFKERLRKGEVQIGLWLSSTTAYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASQPVIRPVEGSKPLIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIRAAGKAAGFLAVAPDMAQQCLAWGANFVAVGVDTMLYSDALDQRLAMFKS
C: MNALLSNPFKERLRKGEVQIGLWLSSTTAYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASQPVIRPVEGSKPLIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIRAAGKAAGFLAVAPDMAQQCLAWGANFVAVGVDTMLYSDALDQRLAMFKS
B: MNALLSNPFKERLRKGEVQIGLWLSSTTAYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASQPVIRPVEGSKPLIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIRAAGKAAGFLAVAPDMAQQCLAWGANFVAVGVDTMLYSDALDQRLAMFKS
Distance of aggregation 10 Å
Dynamic mode No
Show buried residues

Minimal score value
-3.8526
Maximal score value
1.8923
Average score
-0.5592
Total score value
-429.4484

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.3898
2 N A -0.6996
3 A A -0.6836
4 L A 0.6617
5 L A -0.1578
6 S A -0.3049
7 N A 0.0000
8 P A -1.0827
9 F A 0.0000
10 K A 0.0000
11 E A -2.9497
12 R A -3.0655
13 L A 0.0000
14 R A -3.7575
15 K A -3.5673
16 G A -2.6055
17 E A -2.2139
18 V A 0.0121
19 Q A 0.0000
20 I A 0.4239
21 G A 0.0000
22 L A 0.0000
23 W A 0.0000
24 L A 0.0000
25 S A 0.0000
26 S A 0.1062
27 T A 0.0000
28 T A 0.1272
29 A A 0.1405
30 Y A 1.2289
31 M A 0.8492
32 A A 0.0000
33 E A -0.2178
34 I A 0.7834
35 A A 0.0000
36 A A 0.0000
37 T A -0.1169
38 S A -0.3864
39 G A -0.5988
40 Y A -0.3366
41 D A -0.8953
42 W A 0.0000
43 L A 0.0000
44 L A 0.0000
45 I A 0.0000
46 D A 0.0000
47 G A 0.0000
48 E A 0.0000
49 H A 0.0000
50 A A 0.0000
51 P A -0.0046
52 N A 0.0000
53 T A -0.0923
54 I A -0.0181
55 Q A -0.4274
56 D A -0.6772
57 L A 0.0000
58 Y A -0.5779
59 H A -1.0869
60 Q A 0.0000
61 L A 0.0000
62 Q A -1.3468
63 A A -0.5299
64 V A 0.0000
65 A A -0.4773
66 P A -0.2869
67 Y A 0.0683
68 A A -0.1376
69 S A 0.0000
70 Q A -0.4599
71 P A -0.2488
72 V A 0.0000
73 I A 0.0000
74 R A 0.0000
75 P A 0.0000
76 V A 0.0594
77 E A -0.4387
78 G A -0.5247
79 S A -0.6279
80 K A -1.1202
81 P A -0.3124
82 L A -0.0080
83 I A 0.0000
84 K A 0.0000
85 Q A 0.0000
86 V A 0.0000
87 L A 0.0000
88 D A 0.0000
89 I A 0.0000
90 G A -0.2766
91 A A 0.0000
92 Q A -0.3607
93 T A 0.0000
94 L A 0.0000
95 L A 0.0000
96 I A 0.0000
97 P A 0.0000
98 M A 0.1488
99 V A 0.0000
100 D A -1.1584
101 T A -2.1079
102 A A -2.9642
103 E A -3.3178
104 Q A -2.4759
105 A A 0.0000
106 R A -3.7572
107 Q A -3.0780
108 V A 0.0000
109 V A -1.9003
110 S A -1.6452
111 A A 0.0000
112 T A -1.1881
113 R A -1.1430
114 Y A 0.0000
115 P A -0.5594
116 P A -0.1394
117 Y A 0.6077
118 G A -1.0091
119 E A -2.0267
120 R A 0.0000
121 G A -0.6846
122 V A -0.3967
123 G A -0.0980
124 A A 0.0000
125 S A -0.8282
126 V A 0.0709
127 A A 0.0000
128 R A 0.0000
129 A A 0.0000
130 A A 0.0000
131 R A -1.0020
132 W A -0.4825
133 G A -1.7504
134 R A -1.5597
135 I A 0.0000
136 E A -2.8294
137 N A -2.5521
138 Y A 0.0000
139 M A -1.1807
140 A A -1.2563
141 Q A -1.1944
142 V A 0.0000
143 N A -2.3157
144 D A -2.5432
145 S A 0.0000
146 L A -1.0453
147 C A 0.0000
148 L A 0.0000
149 L A 0.0000
150 V A 0.0000
151 Q A 0.0000
152 V A 0.0000
153 E A -0.5312
154 S A -1.3954
155 K A -2.2460
156 T A -1.5846
157 A A 0.0000
158 L A -1.7572
159 D A -2.8321
160 N A -2.4766
161 L A 0.0000
162 D A -3.7510
163 E A -3.8131
164 I A 0.0000
165 L A 0.0000
166 D A -3.5778
167 V A 0.0000
168 E A -2.8127
169 G A -2.2500
170 I A 0.0000
171 D A -1.0505
172 G A 0.0000
173 V A 0.0000
174 F A 0.0000
175 I A 0.0000
176 G A -0.0767
177 P A -0.1355
178 A A -0.3233
179 D A -0.7272
180 L A 0.0000
181 S A 0.0000
182 A A 0.0000
183 S A -0.9811
184 L A -0.6424
185 G A -1.0620
186 Y A -1.2890
187 P A -1.2585
188 D A -2.6772
189 N A -2.2837
190 A A -1.5323
191 G A -1.5936
192 H A -2.2658
193 P A -2.0513
194 E A -2.4478
195 V A 0.0000
196 Q A -2.5174
197 R A -2.9523
198 I A -1.6782
199 I A 0.0000
200 E A -2.3550
201 T A -2.0887
202 S A 0.0000
203 I A 0.0000
204 R A -3.1746
205 R A -3.4964
206 I A 0.0000
207 R A -2.2565
208 A A -1.7075
209 A A -1.8259
210 G A -1.3888
211 K A -1.5855
212 A A 0.0000
213 A A 0.0000
214 G A 0.0000
215 F A 0.0000
216 L A 0.8346
217 A A 0.0000
218 V A 1.8392
219 A A 0.1904
220 P A -0.9024
221 D A -2.0424
222 M A -0.9690
223 A A 0.0000
224 Q A -1.8458
225 Q A -1.5238
226 C A 0.0000
227 L A -0.1147
228 A A -0.2928
229 W A -0.7895
230 G A -0.7549
231 A A 0.0000
232 N A 0.0000
233 F A 0.0000
234 V A 0.0000
235 A A 0.0000
236 V A 0.8335
237 G A 1.1989
238 V A 0.0000
239 D A 0.0000
240 T A 0.3879
241 M A 0.7522
242 L A 1.0490
243 Y A 0.5149
244 S A -0.3908
245 D A -1.4399
246 A A -0.5696
247 L A 0.3573
248 D A -0.8271
249 Q A -1.4115
250 R A -1.1142
251 L A 0.8097
252 A A 0.3622
253 M A 1.1194
254 F A 1.6162
255 K A -0.3691
256 S A -0.2727
1 M B 0.4001
2 N B -0.6877
3 A B -0.6628
4 L B 0.6545
5 L B -0.0547
6 S B -0.3514
7 N B 0.0000
8 P B -0.9686
9 F B 0.0000
10 K B 0.0000
11 E B -2.8750
12 R B -2.4612
13 L B 0.0000
14 R B -3.6921
15 K B -3.3407
16 G B -2.3194
17 E B -1.7436
18 V B 0.8315
19 Q B 0.0000
20 I B 0.8494
21 G B 0.0000
22 L B 0.0000
23 W B 0.0000
24 L B 0.0000
25 S B 0.0000
26 S B 0.1231
27 T B -0.1059
28 T B 0.0763
29 A B 0.0215
30 Y B 1.1912
31 M B 0.8367
32 A B 0.0000
33 E B -0.3147
34 I B 0.7978
35 A B 0.0000
36 A B 0.0000
37 T B -0.1174
38 S B -0.3391
39 G B -0.4818
40 Y B -0.1148
41 D B -0.3075
42 W B 0.0000
43 L B 0.0000
44 L B 0.0000
45 I B 0.0000
46 D B 0.0000
47 G B 0.0000
48 E B 0.0000
49 H B 0.0000
50 A B 0.0000
51 P B -0.1110
52 N B 0.0000
53 T B -0.1565
54 I B 0.0181
55 Q B -0.4539
56 D B -0.7555
57 L B 0.0000
58 Y B -0.7107
59 H B -1.3714
60 Q B 0.0000
61 L B 0.0000
62 Q B -1.6854
63 A B -0.7290
64 V B 0.0000
65 A B -0.6086
66 P B -0.3377
67 Y B 0.0587
68 A B -0.0569
69 S B 0.0000
70 Q B -0.3592
71 P B -0.2122
72 V B 0.0000
73 I B 0.0000
74 R B 0.0000
75 P B 0.0000
76 V B 0.0742
77 E B -0.3910
78 G B -0.4839
79 S B -0.5752
80 K B -1.0995
81 P B -0.3061
82 L B 0.1428
83 I B 0.0000
84 K B 0.0000
85 Q B 0.0000
86 V B 0.0000
87 L B 0.0000
88 D B 0.0000
89 I B 0.0000
90 G B -0.1990
91 A B 0.0000
92 Q B -0.4682
93 T B 0.0000
94 L B 0.0000
95 L B 0.0000
96 I B 0.0000
97 P B 0.0000
98 M B -0.1044
99 V B 0.0000
100 D B -1.1919
101 T B -2.1105
102 A B 0.0000
103 E B -3.2361
104 Q B -2.4163
105 A B 0.0000
106 R B -3.5659
107 Q B -2.6140
108 V B 0.0000
109 V B 0.0000
110 S B -1.3836
111 A B 0.0000
112 T B 0.0000
113 R B -0.8368
114 Y B 0.0000
115 P B -0.3561
116 P B -0.0863
117 Y B 0.5346
118 G B -0.8833
119 E B -1.9390
120 R B 0.0000
121 G B -0.5061
122 V B 0.0060
123 G B 0.1010
124 A B 0.0000
125 S B -0.5814
126 V B 0.0744
127 A B 0.0000
128 R B 0.0000
129 A B 0.0000
130 A B 0.0000
131 R B -0.9681
132 W B -0.6417
133 G B -1.5815
134 R B -1.5659
135 I B 0.0000
136 E B -2.5770
137 N B -2.2205
138 Y B -1.1764
139 M B -0.9636
140 A B -1.3949
141 Q B -1.1556
142 V B 0.0000
143 N B -2.1361
144 D B -2.6000
145 S B 0.0000
146 L B 0.0000
147 C B 0.0000
148 L B 0.0000
149 L B 0.0000
150 V B 0.0000
151 Q B 0.0000
152 V B 0.0000
153 E B 0.0000
154 S B -1.0181
155 K B -1.8242
156 T B -1.4494
157 A B 0.0000
158 L B -1.6604
159 D B -2.7780
160 N B -2.4825
161 L B 0.0000
162 D B -3.7922
163 E B -3.8526
164 I B 0.0000
165 L B 0.0000
166 D B -3.6453
167 V B 0.0000
168 E B -2.7794
169 G B -2.1505
170 I B 0.0000
171 D B -1.1106
172 G B 0.0000
173 V B 0.0000
174 F B 0.0000
175 I B 0.0000
176 G B -0.0572
177 P B -0.3377
178 A B -0.8369
179 D B -0.4831
180 L B 0.0000
181 S B 0.0000
182 A B 0.0000
183 S B 0.0000
184 L B -0.4113
185 G B -0.4885
186 Y B -1.1334
187 P B -1.3569
188 D B -2.6849
189 N B -2.4090
190 A B -1.7111
191 G B -1.7752
192 H B -1.9897
193 P B -1.8346
194 E B -2.1747
195 V B 0.0000
196 Q B -1.9036
197 R B -2.5750
198 I B -1.0166
199 I B 0.0000
200 E B -1.9656
201 T B -1.7352
202 S B 0.0000
203 I B 0.0000
204 R B -2.8608
205 R B -3.3229
206 I B 0.0000
207 R B -2.0237
208 A B -1.7140
209 A B -1.7243
210 G B -1.5265
211 K B -1.5676
212 A B 0.0000
213 A B 0.0000
214 G B 0.0000
215 F B 0.0000
216 L B 0.8962
217 A B 0.0000
218 V B 1.8923
219 A B 0.2340
220 P B -0.8782
221 D B -2.0720
222 M B -0.9671
223 A B 0.0000
224 Q B -1.8096
225 Q B -1.4643
226 C B 0.0000
227 L B 0.2258
228 A B -0.2667
229 W B -0.6616
230 G B -0.5473
231 A B 0.0000
232 N B 0.0000
233 F B 0.0000
234 V B 0.0000
235 A B 0.0000
236 V B 1.0087
237 G B 0.0000
238 V B 0.0000
239 D B 0.0000
240 T B 0.3712
241 M B 0.7521
242 L B 0.9848
243 Y B 0.5585
244 S B -0.2227
245 D B -1.4529
246 A B -0.5617
247 L B 0.3669
248 D B -0.8422
249 Q B -1.4253
250 R B -1.1260
251 L B 0.7993
252 A B 0.3176
253 M B 1.0427
254 F B 1.5636
255 K B -0.3840
256 S B 0.1558
1 M C 0.4100
2 N C -0.6870
3 A C -0.6682
4 L C 0.6198
5 L C -0.0883
6 S C -0.3859
7 N C 0.0000
8 P C -1.1004
9 F C 0.0000
10 K C 0.0000
11 E C -3.1033
12 R C -2.5673
13 L C 0.0000
14 R C -3.6194
15 K C -3.2856
16 G C -2.1466
17 E C -1.3279
18 V C 0.6649
19 Q C 0.0000
20 I C 0.7665
21 G C 0.0000
22 L C 0.0000
23 W C 0.0000
24 L C 0.0000
25 S C 0.0000
26 S C 0.1291
27 T C -0.0978
28 T C 0.1097
29 A C 0.0733
30 Y C 1.2704
31 M C 0.9722
32 A C 0.0000
33 E C -0.1921
34 I C 0.9227
35 A C 0.0000
36 A C 0.0000
37 T C -0.0970
38 S C -0.3062
39 G C -0.4613
40 Y C -0.0714
41 D C -0.2094
42 W C 0.0000
43 L C 0.0000
44 L C 0.0000
45 I C 0.0000
46 D C 0.0000
47 G C 0.0000
48 E C 0.0000
49 H C 0.0000
50 A C 0.0000
51 P C -0.0469
52 N C 0.0000
53 T C -0.2182
54 I C 0.0000
55 Q C -0.5465
56 D C -0.8127
57 L C 0.0000
58 Y C -0.7514
59 H C -1.3901
60 Q C 0.0000
61 L C 0.0000
62 Q C -1.6753
63 A C -0.6914
64 V C 0.0000
65 A C -0.6269
66 P C -0.3625
67 Y C 0.0032
68 A C -0.0641
69 S C 0.0000
70 Q C -0.3838
71 P C -0.2182
72 V C 0.0000
73 I C 0.0000
74 R C 0.0000
75 P C 0.0000
76 V C 0.0648
77 E C -0.4150
78 G C -0.4065
79 S C -0.4354
80 K C -0.7771
81 P C -0.3447
82 L C 0.0214
83 I C 0.0000
84 K C 0.0000
85 Q C -0.1096
86 V C 0.0000
87 L C 0.0000
88 D C 0.0000
89 I C 0.0000
90 G C -0.1768
91 A C 0.0000
92 Q C -0.3781
93 T C 0.0000
94 L C 0.0000
95 L C 0.0000
96 I C 0.0000
97 P C 0.0000
98 M C -0.2324
99 V C 0.0000
100 D C -1.2909
101 T C -2.0631
102 A C -2.7899
103 E C -3.1578
104 Q C -2.2735
105 A C 0.0000
106 R C -3.4758
107 Q C -2.3691
108 V C 0.0000
109 V C 0.0000
110 S C -1.0732
111 A C 0.0000
112 T C 0.0000
113 R C -0.6941
114 Y C 0.0000
115 P C -0.1064
116 P C 0.1343
117 Y C 0.8360
118 G C -0.4025
119 E C -0.9307
120 R C 0.0000
121 G C -0.3845
122 V C -0.3262
123 G C 0.0086
124 A C 0.0000
125 S C -0.6068
126 V C 0.1098
127 A C 0.0000
128 R C 0.0000
129 A C 0.0000
130 A C 0.0000
131 R C -0.9394
132 W C -0.4741
133 G C -1.3988
134 R C -1.6298
135 I C 0.0000
136 E C -2.6141
137 N C -2.3413
138 Y C 0.0000
139 M C -1.1236
140 A C -1.3001
141 Q C -1.1981
142 V C 0.0000
143 N C -2.2515
144 D C -2.5551
145 S C 0.0000
146 L C -0.9768
147 C C 0.0000
148 L C 0.0000
149 L C 0.0000
150 V C 0.0000
151 Q C 0.0000
152 V C 0.0000
153 E C -0.4831
154 S C -1.1639
155 K C -1.5674
156 T C -1.3660
157 A C 0.0000
158 L C -1.4794
159 D C -2.6122
160 N C -2.2632
161 L C 0.0000
162 D C -3.0556
163 E C -3.5113
164 I C 0.0000
165 L C 0.0000
166 D C -3.4372
167 V C 0.0000
168 E C -2.6967
169 G C -1.7896
170 I C 0.0000
171 D C 0.0000
172 G C 0.0000
173 V C 0.0000
174 F C 0.0000
175 I C 0.0000
176 G C 0.0000
177 P C -0.3643
178 A C -0.5670
179 D C -0.4356
180 L C 0.0000
181 S C 0.0000
182 A C 0.0000
183 S C 0.0000
184 L C -0.2450
185 G C 0.0589
186 Y C -0.5259
187 P C -1.1162
188 D C -1.8735
189 N C -2.4343
190 A C -1.0822
191 G C -1.3754
192 H C -1.4562
193 P C -1.7835
194 E C -2.3321
195 V C 0.0000
196 Q C -1.8347
197 R C -2.0474
198 I C -0.3973
199 I C 0.0000
200 E C 0.0000
201 T C -1.3541
202 S C 0.0000
203 I C 0.0000
204 R C -2.7543
205 R C -2.8249
206 I C 0.0000
207 R C -2.0356
208 A C -1.5212
209 A C -1.5980
210 G C -1.4282
211 K C -1.3802
212 A C 0.0000
213 A C 0.0000
214 G C 0.0000
215 F C 0.0000
216 L C 0.8886
217 A C 0.0000
218 V C 1.8572
219 A C 0.1552
220 P C -0.8832
221 D C -2.0785
222 M C -0.8817
223 A C 0.0000
224 Q C -1.7761
225 Q C -1.2523
226 C C 0.0000
227 L C 0.1518
228 A C -0.1359
229 W C -0.5335
230 G C -0.5482
231 A C 0.0000
232 N C 0.0000
233 F C 0.0000
234 V C 0.0000
235 A C 0.0000
236 V C 1.0526
237 G C 0.0000
238 V C 0.0000
239 D C 0.0000
240 T C 0.7233
241 M C 0.9737
242 L C 1.3639
243 Y C 1.3238
244 S C 0.0182
245 D C -1.3869
246 A C -0.5086
247 L C 0.0832
248 D C -0.9791
249 Q C -1.4925
250 R C -1.2870
251 L C 0.6716
252 A C 0.3026
253 M C 1.1063
254 F C 1.6023
255 K C -0.3670
256 S C -0.2739

 

Laboratory of Theory of Biopolymers 2015