Project name: SH3_V88M

Status: done

submitted: 2019-03-14 18:56:08, status changed: 2019-03-14 19:21:22
Settings
Chain sequence(s) A: TLFVALYDYEARTEDDLSFHKGEEKFQQILNSSEGDWWEARRSLTTGETGYIPSNYVAPV
Distance of aggregation 10 Å
Dynamic mode No
Mutated residues VA88M
Energy difference between WT (input) and mutated protein (by FoldX) 0.332937 kcal/mol

Changes in protein stability upon mutation are calculated using the FoldX forcefield. Computational prediction of protein stability is used with the intention of preventing the experimental characterization of proteins bearing mutations that significantly destabilize their structure. Mutations resulting in a predicted reduction in protein stability ≥ 1 kcal/mol are considered disruptive.

Show buried residues

Minimal score value
-3.1028
Maximal score value
1.7839
Average score
-0.9705
Total score value
-55.3212

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
85 T A 0.5125
86 L A 0.7789
87 F A 0.8905
88 M A 0.3702 mutated: VA88M
89 A A 0.0000
90 L A -0.2693
91 Y A -0.6305
92 D A -2.5823
93 Y A -1.9449
94 E A -2.6452
95 A A -2.6259
96 R A -2.9852
97 T A -2.6608
98 E A -3.1028
99 D A -3.0434
100 D A 0.0000
101 L A 0.0000
102 S A -2.2059
103 F A 0.0000
104 H A -2.7506
105 K A -2.4514
106 G A -1.4994
107 E A -1.3400
108 K A -0.6849
109 F A 0.0000
110 Q A -0.5155
111 I A -0.0606
112 L A 0.1430
113 N A -0.8879
114 S A -1.1794
115 S A -1.5962
116 E A -2.5599
117 G A -2.1340
118 D A -2.4444
119 W A -1.1028
120 W A -1.0557
121 E A -1.1529
122 A A 0.0000
123 R A -1.7152
124 S A 0.0000
125 L A 0.0655
126 T A -0.4698
127 T A -0.8181
128 G A -1.3518
129 E A -2.2372
130 T A -1.6906
131 G A -1.4991
132 Y A -0.8673
133 I A 0.0000
134 P A 0.0000
135 S A -0.9206
136 N A -1.1660
137 Y A -0.1627
138 V A 0.0000
139 A A 0.3797
140 P A 0.7648
141 V A 1.7839

 

Laboratory of Theory of Biopolymers 2015