Project name: 20190218h8C12woDyn [mutate: LH11K, VH120K]

Status: done

submitted: 2019-02-19 09:51:45, status changed: 2019-02-19 10:01:58
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Chain sequence(s) H: QVQLQESGPGLVKPSETLSLTCTVSGFSLNSFGWSWIRQPPGKGLEWIGYIWAGKNTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARAGYGNSLDYWGQGTTLTVSSDIVMTQSPDSLAVSLGERATINCKSSQSLLNSGNQRNYLTWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQNNYYFPLTFGTGTKLEIK
Distance of aggregation 5 Å
Dynamic mode No
Mutated residues LH11K, VH120K
Energy difference between WT (input) and mutated protein (by FoldX) 0.32927 kcal/mol

Changes in protein stability upon mutation are calculated using the FoldX forcefield. Computational prediction of protein stability is used with the intention of preventing the experimental characterization of proteins bearing mutations that significantly destabilize their structure. Mutations resulting in a predicted reduction in protein stability ≥ 1 kcal/mol are considered disruptive.

Show buried residues

Minimal score value
-2.2239
Maximal score value
1.4972
Average score
-0.2921
Total score value
-67.1726

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.1983
2 V H 0.0000
3 Q H -1.1983
4 L H 0.0000
5 Q H -0.7537
6 E H 0.0000
7 S H -0.2494
8 G H -0.5232
9 P H -0.3590
10 G H -0.6515
11 K H -1.7548 mutated: LH11K
12 V H 0.0000
13 K H -1.7282
14 P H -0.5037
15 S H -0.4167
16 E H -0.8205
17 T H -0.2116
18 L H 0.0000
19 S H -0.3001
20 L H 0.0000
21 T H -0.0229
22 C H 0.0000
23 T H -0.0480
24 V H 0.0000
25 S H -0.2830
26 G H -0.4508
27 F H 0.1799
28 S H -0.0289
29 L H 0.0000
30 N H -1.0606
31 S H -0.2295
32 F H 0.7313
33 G H 0.0000
34 W H 0.0000
35 S H 0.0000
36 W H 0.0000
37 I H 0.0000
38 R H 0.0000
39 Q H -0.1307
40 P H -0.1007
41 P H -0.3468
42 G H -0.8280
43 K H -1.7985
44 G H -0.3895
45 L H 0.0000
46 E H -0.5577
47 W H 0.0000
48 I H 0.0000
49 G H 0.0000
50 Y H 0.1570
51 I H 0.0000
52 W H 0.5091
53 A H -0.0597
54 G H -0.7676
55 K H -2.0205
56 N H -1.5913
57 T H -0.3575
58 N H -0.5086
59 Y H 0.1544
60 N H -0.1073
61 P H -0.2549
62 S H -0.2482
63 L H 0.0000
64 K H -1.7391
65 S H -0.5936
66 R H -0.4175
67 V H 0.0000
68 T H -0.0263
69 I H 0.0000
70 S H -0.1050
71 V H 0.1247
72 D H -0.5080
73 T H -0.2320
74 S H -0.5368
75 K H -1.7854
76 N H -0.6124
77 Q H -0.2727
78 F H 0.0000
79 S H -0.0591
80 L H 0.0000
81 K H -0.9470
82 L H 0.0000
83 S H -0.1451
84 S H -0.2586
85 V H 0.0000
86 T H -0.0421
87 A H 0.0593
88 A H 0.0691
89 D H 0.0000
90 T H -0.0178
91 A H 0.0000
92 V H 0.4243
93 Y H 0.0000
94 Y H 0.0000
95 C H 0.0000
96 A H 0.0000
97 R H 0.0000
98 A H 0.0000
99 G H 0.1675
100 Y H 1.2184
101 G H -0.2291
102 N H 0.0000
103 S H -0.0249
104 L H 0.0000
105 D H -1.4296
106 Y H 0.1112
107 W H 0.2293
108 G H 0.0000
109 Q H -1.1983
110 G H 0.0000
111 T H -0.0237
112 T H -0.0118
113 L H 0.0000
114 T H -0.0229
115 V H 0.0000
116 S H -0.1529
117 S H -0.2340
118 D H -1.7526
119 I H -0.4396
120 K H -1.6634 mutated: VH120K
121 M H 0.0000
122 T H -0.0645
123 Q H 0.0000
124 S H -0.1617
125 P H -0.4531
126 D H -1.8447
127 S H -0.6057
128 L H 0.2906
129 A H -0.2848
130 V H 0.0000
131 S H -0.0628
132 L H 1.0534
133 G H -0.4840
134 E H -2.2239
135 R H -2.1936
136 A H 0.0000
137 T H -0.0444
138 I H 0.0000
139 N H -0.5002
140 C H 0.0000
141 K H -1.0069
142 S H 0.0000
143 S H -0.4002
144 Q H -1.2555
145 S H -0.3632
146 L H 0.0000
147 L H 0.3796
148 N H -0.1560
149 S H -0.4732
150 G H -0.7087
151 N H -1.4291
152 Q H -1.6059
153 R H -1.1931
154 N H -0.2031
155 Y H 0.1824
156 L H 0.0000
157 T H 0.0000
158 W H 0.0000
159 Y H 0.0000
160 Q H 0.0000
161 Q H 0.0000
162 K H -0.7732
163 P H -0.4722
164 G H -0.7263
165 Q H -1.2589
166 P H -0.2772
167 P H 0.0000
168 K H -1.4783
169 L H -0.1142
170 L H 0.0000
171 I H 0.0000
172 Y H 0.2410
173 W H 0.4203
174 A H 0.0000
175 S H -0.2199
176 T H -0.2010
177 R H -0.8519
178 E H -0.7330
179 S H -0.4000
180 G H -0.5053
181 V H 0.0000
182 P H -0.4223
183 D H -1.8605
184 R H -0.6319
185 F H 0.0000
186 S H -0.1004
187 G H -0.1332
188 S H -0.2634
189 G H -0.3037
190 S H -0.2690
191 G H -0.1388
192 T H -0.3766
193 D H -1.8853
194 F H 0.0000
195 T H -0.0801
196 L H 0.0000
197 T H -0.0242
198 I H 0.0000
199 S H -0.3847
200 S H -0.5434
201 L H 0.0000
202 Q H -0.4098
203 A H -0.3516
204 E H -1.8092
205 D H 0.0000
206 V H 0.4819
207 A H 0.0000
208 V H 0.0544
209 Y H 0.0000
210 Y H 0.0000
211 C H 0.0000
212 Q H 0.0000
213 N H 0.0000
214 N H -0.1013
215 Y H 0.4350
216 Y H 1.4972
217 F H 0.9958
218 P H 0.1588
219 L H 0.0000
220 T H 0.0232
221 F H 0.1968
222 G H 0.0000
223 T H -0.0777
224 G H 0.0000
225 T H 0.0000
226 K H -1.0576
227 L H 0.0000
228 E H -1.4480
229 I H 0.5204
230 K H -1.4950

 

Laboratory of Theory of Biopolymers 2015