Project name: SH3_A139R

Status: done

submitted: 2019-03-14 19:25:30, status changed: 2019-03-14 23:05:45
Settings
Chain sequence(s) A: TLFVALYDYEARTEDDLSFHKGEEKFQQILNSSEGDWWEARRSLTTGETGYIPSNYVAPV
Distance of aggregation 10 Å
Dynamic mode No
Mutated residues AA139R
Energy difference between WT (input) and mutated protein (by FoldX) -0.509799 kcal/mol

Changes in protein stability upon mutation are calculated using the FoldX forcefield. Computational prediction of protein stability is used with the intention of preventing the experimental characterization of proteins bearing mutations that significantly destabilize their structure. Mutations resulting in a predicted reduction in protein stability ≥ 1 kcal/mol are considered disruptive.

Show buried residues

Minimal score value
-3.1028
Maximal score value
1.3167
Average score
-1.0991
Total score value
-62.6504

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
85 T A 0.3236
86 L A 0.5144
87 F A 0.2482
88 V A -0.2396
89 A A 0.0000
90 L A -0.8526
91 Y A -0.7135
92 D A -2.6188
93 Y A -1.9667
94 E A -2.6452
95 A A -2.6259
96 R A -2.9852
97 T A -2.6608
98 E A -3.1028
99 D A -3.0434
100 D A 0.0000
101 L A 0.0000
102 S A -2.2059
103 F A 0.0000
104 H A -2.7721
105 K A -2.5045
106 G A -1.7161
107 E A -1.3506
108 K A -0.8888
109 F A 0.0000
110 Q A -0.5091
111 I A -0.0568
112 L A 0.1429
113 N A -0.8879
114 S A -1.1794
115 S A -1.5962
116 E A -2.5599
117 G A -2.1340
118 D A -2.4444
119 W A -1.1028
120 W A -1.0557
121 E A -1.1530
122 A A 0.0000
123 R A -1.7155
124 S A 0.0000
125 L A 0.0592
126 T A -0.4730
127 T A -0.8207
128 G A -1.3572
129 E A -2.2401
130 T A -1.6927
131 G A -1.4992
132 Y A -0.8673
133 I A 0.0000
134 P A 0.0000
135 S A -1.2320
136 N A -1.5338
137 Y A -0.6104
138 V A 0.0000
139 R A -1.5059 mutated: AA139R
140 P A -0.1359
141 V A 1.3167

 

Laboratory of Theory of Biopolymers 2015