Project name: SH3_T125R

Status: done

submitted: 2019-03-14 15:34:51, status changed: 2019-03-14 18:07:31
Settings
Chain sequence(s) A: GSHMTFVALYDYESRTETDLSFKKGERLQIVNNTEGDWWLAHSLTTGQTGYIPSNYVAPS
Distance of aggregation 10 Å
Dynamic mode No
Mutated residues TA125R
Energy difference between WT (input) and mutated protein (by FoldX) -0.26521 kcal/mol

Changes in protein stability upon mutation are calculated using the FoldX forcefield. Computational prediction of protein stability is used with the intention of preventing the experimental characterization of proteins bearing mutations that significantly destabilize their structure. Mutations resulting in a predicted reduction in protein stability ≥ 1 kcal/mol are considered disruptive.

Show buried residues

Minimal score value
-3.5789
Maximal score value
1.2498
Average score
-0.9668
Total score value
-58.0071

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
81 G A -0.4510
82 S A -0.6826
83 H A -0.7912
84 M A 0.2668
85 T A 0.0000
86 F A -0.0637
87 V A -0.5303
88 A A 0.0000
89 L A -0.2281
90 Y A -0.6481
91 D A -2.7331
92 Y A -2.0656
93 E A -2.8632
94 S A 0.0000
95 R A -2.7837
96 T A -2.1540
97 E A -2.3526
98 T A -1.2414
99 D A -1.3229
100 L A 0.0000
101 S A -1.8898
102 F A 0.0000
103 K A -3.5789
104 K A -2.6974
105 G A -1.9078
106 E A 0.0000
107 R A -2.5129
108 L A 0.0000
109 Q A -0.2430
110 I A 0.4401
111 V A 1.2498
112 N A -0.4200
113 N A -1.8142
114 T A -1.7328
115 E A -2.9363
116 G A -2.6085
117 D A -2.6844
118 W A -1.3424
119 W A -0.6978
120 L A 0.4047
121 A A 0.0000
122 H A -0.6229
123 S A 0.0000
124 L A -1.1464
125 R A -2.5253 mutated: TA125R
126 T A -1.7450
127 G A -1.3111
128 Q A -1.6987
129 T A -0.4959
130 G A 0.0000
131 Y A 0.2197
132 I A 0.0000
133 P A 0.0000
134 S A -1.2857
135 N A -1.2485
136 Y A -0.1912
137 V A 0.0000
138 A A -0.0212
139 P A -0.1473
140 S A -0.1713

 

Laboratory of Theory of Biopolymers 2015