Project name: wt20 [mutate: VA316K, IA141K]

Status: done

submitted: 2018-11-08 12:55:47, status changed: 2018-11-08 13:13:40
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Chain sequence(s) A: MRSGSHHHHHHRSDITSLYKKAGSAAAPFTMENLYFQSYQGNSDCYFGNGSAYRGTHSLTESGASCLPWNSMILIGKVYTAQNPSAQALGLGKHNYCRNPDGDAKPWCHVLKNRRLTWEYCDVPSCSTCGLRQYSQPQFRIKGGLFADIASHPWQAAIFAKHRRSPGERFLCGGILISSCWILSAAHCFQERFPPHHLTVILGRTYRVVPGEEEQKFEVEKYIVHKEFDDDTYDNDIALLQLKSDSSRCAQESSVVRTVCLPPADLQLPDWTECELSGYGKHEALSPFYSERLKEAHVRLYPSSRCTSQHLLNRTVTDNMLCAGDTRSGGPQANLHDACQGDSGGPLVCLNDGRMTLVGIISWGLGCGQKDVPGVYTKVTNYLDWIRDNMRP
Distance of aggregation 10 Å
Dynamic mode No
Mutated residues VA316K, IA141K
Energy difference between WT (input) and mutated protein (by FoldX) -1.51685 kcal/mol

Changes in protein stability upon mutation are calculated using the FoldX forcefield. Computational prediction of protein stability is used with the intention of preventing the experimental characterization of proteins bearing mutations that significantly destabilize their structure. Mutations resulting in a predicted reduction in protein stability ≥ 1 kcal/mol are considered disruptive.

Show buried residues

Minimal score value
-3.6836
Maximal score value
2.0809
Average score
-0.6385
Total score value
-249.6701

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A -0.0801
2 R A -1.5302
3 S A -0.6471
4 G A -0.5188
5 S A -0.3363
6 H A 0.0000
7 H A -0.5484
8 H A -0.7122
9 H A -1.1304
10 H A -1.8419
11 H A -1.6278
12 R A -1.7657
13 S A 0.0000
14 D A 0.0000
15 I A 0.8741
16 T A 0.0586
17 S A 0.1158
18 L A 0.2267
19 Y A 0.0000
20 K A -1.5254
21 K A -2.2763
22 A A -1.2246
23 G A -1.3128
24 S A -0.8783
25 A A 0.0000
26 A A 0.0121
27 A A 0.4178
28 P A -0.0139
29 F A 0.0000
30 T A -0.6209
31 M A -0.5233
32 E A -1.9851
33 N A -1.3345
34 L A 0.1384
35 Y A 0.8278
36 F A 0.1356
37 Q A -0.9128
38 S A -1.0304
39 Y A 0.0000
40 Q A 0.0000
41 G A -0.6842
42 N A -0.9181
43 S A 0.0000
44 D A -0.3436
45 C A 0.3601
46 Y A 1.0782
47 F A 0.0000
48 G A 0.0000
49 N A 0.0000
50 G A 0.0000
51 S A 0.0000
52 A A -0.9921
53 Y A 0.0000
54 R A -0.8042
55 G A -0.6622
56 T A -0.3871
57 H A -0.2309
58 S A -0.1047
59 L A -0.2612
60 T A 0.0000
61 E A -2.2301
62 S A -1.3951
63 G A -1.1678
64 A A -0.8160
65 S A -0.2698
66 C A 0.0000
67 L A -0.0111
68 P A -0.8679
69 W A 0.0000
70 N A -1.1668
71 S A 0.4241
72 M A 1.6557
73 I A 2.0809
74 L A 0.0000
75 I A 0.8974
76 G A -0.0480
77 K A -0.3606
78 V A 0.7440
79 Y A 0.9141
80 T A 0.3817
81 A A 0.0209
82 Q A -0.2499
83 N A -0.4280
84 P A -0.5135
85 S A -0.9423
86 A A 0.0000
87 Q A 0.0000
88 A A 0.0000
89 L A 0.0000
90 G A 0.0000
91 L A 0.0000
92 G A -1.5609
93 K A -2.3765
94 H A -1.3857
95 N A 0.0000
96 Y A -0.2161
97 C A 0.0000
98 R A 0.0000
99 N A 0.0000
100 P A -1.1540
101 D A -2.0428
102 G A -1.6743
103 D A -1.3116
104 A A -0.8229
105 K A -1.0038
106 P A 0.0000
107 W A -0.2377
108 C A 0.0000
109 H A 0.0000
110 V A 0.0000
111 L A -1.2563
112 K A -2.7801
113 N A -3.1807
114 R A -3.5320
115 R A -3.0841
116 L A -1.2163
117 T A -0.7366
118 W A 0.0178
119 E A -0.8736
120 Y A -0.4205
121 C A 0.0000
122 D A -1.4907
123 V A 0.0000
124 P A -0.2602
125 S A -0.1200
126 C A 0.0649
127 S A 0.0000
128 T A 0.0000
129 C A 0.0000
130 G A -0.0956
131 L A 0.2616
132 R A 0.0000
133 Q A -0.5890
134 Y A 0.4606
135 S A -0.1469
136 Q A -0.8974
137 P A -1.5030
138 Q A -2.0335
139 F A -1.8337
140 R A -3.0385
141 K A -2.7753 mutated: IA141K
142 K A -1.4118
143 G A -1.0014
144 G A -0.2716
145 L A 1.0220
146 F A 0.7856
147 A A -0.3009
148 D A -1.3183
149 I A 0.0000
150 A A -0.3971
151 S A 0.0000
152 H A 0.0000
153 P A 0.0000
154 W A 0.0000
155 Q A 0.0000
156 A A 0.0000
157 A A 0.0000
158 I A 0.0000
159 F A 0.0000
160 A A 0.0000
161 K A -2.6751
162 H A -2.8032
163 R A -3.4371
164 R A -3.6836
165 S A -2.0517
166 P A -1.6074
167 G A -2.2118
168 E A -2.7575
169 R A -2.3576
170 F A -0.8480
171 L A -0.1031
172 C A 0.0000
173 G A 0.0000
174 G A 0.0000
175 I A 0.0000
176 L A 0.0000
177 I A 0.0000
178 S A -0.7496
179 S A -1.2417
180 C A 0.0000
181 W A 0.0000
182 I A 0.0000
183 L A 0.0000
184 S A 0.0000
185 A A 0.0000
186 A A 0.0000
187 H A -1.4035
188 C A -0.5003
189 F A 0.0000
190 Q A 0.0000
191 E A -2.6280
192 R A -2.6091
193 F A -1.6890
194 P A -1.4615
195 P A -1.8001
196 H A -1.9382
197 H A -2.0965
198 L A 0.0000
199 T A 0.0000
200 V A 0.0000
201 I A 0.0000
202 L A -0.2939
203 G A 0.0000
204 R A -0.1018
205 T A 0.1948
206 Y A 1.1882
207 R A 0.8430
208 V A 2.0029
209 V A 1.5282
210 P A 0.4976
211 G A -1.0551
212 E A -2.1387
213 E A -1.8967
214 E A -2.6752
215 Q A -2.4456
216 K A -2.3130
217 F A 0.0000
218 E A -3.2842
219 V A 0.0000
220 E A -2.4782
221 K A -1.8832
222 Y A -0.5026
223 I A -0.4040
224 V A -0.6664
225 H A -1.4535
226 K A -2.6192
227 E A -2.7388
228 F A -2.1423
229 D A -2.5413
230 D A -3.1157
231 D A -2.9967
232 T A -1.8898
233 Y A 0.0000
234 D A -2.3412
235 N A -1.7810
236 D A 0.0000
237 I A 0.0000
238 A A 0.0000
239 L A 0.0000
240 L A 0.0000
241 Q A 0.0000
242 L A 0.0000
243 K A -2.8549
244 S A -2.4205
245 D A -3.3919
246 S A 0.0000
247 S A 0.0000
248 R A -2.3825
249 C A -1.7218
250 A A -1.3093
251 Q A -2.2560
252 E A -2.0873
253 S A -1.5274
254 S A 0.0000
255 V A 0.4977
256 V A 0.0000
257 R A -0.8554
258 T A 0.0000
259 V A 0.0000
260 C A 0.3626
261 L A 0.1985
262 P A 0.0000
263 P A -0.6558
264 A A -1.1904
265 D A -2.1339
266 L A -1.0342
267 Q A -1.4717
268 L A 0.0000
269 P A -1.6947
270 D A -2.1847
271 W A -0.9547
272 T A -0.7174
273 E A -1.4781
274 C A 0.0000
275 E A 0.0000
276 L A 0.0000
277 S A 0.0000
278 G A 0.0000
279 Y A 0.0000
280 G A 0.0000
281 K A -0.4668
282 H A -0.4664
283 E A -1.5949
284 A A -0.0694
285 L A 1.1377
286 S A 0.4978
287 P A 0.9238
288 F A 1.7553
289 Y A 0.6779
290 S A 0.5060
291 E A 0.0000
292 R A -0.1892
293 L A 0.0000
294 K A -0.0246
295 E A 0.0000
296 A A 0.0000
297 H A -1.3501
298 V A 0.0000
299 R A -1.1332
300 L A 0.0000
301 Y A 0.0000
302 P A -1.0293
303 S A -1.2112
304 S A -1.2759
305 R A -2.4155
306 C A 0.0000
307 T A -1.1173
308 S A -0.7191
309 Q A 0.0000
310 H A 0.0000
311 L A -0.7730
312 L A 0.5472
313 N A -0.5929
314 R A -1.2481
315 T A -1.3204
316 K A -1.9112 mutated: VA316K
317 T A -1.6241
318 D A -2.2116
319 N A 0.0000
320 M A 0.0000
321 L A -0.1346
322 C A 0.0000
323 A A 0.0000
324 G A 0.0000
325 D A -2.0232
326 T A -1.2316
327 R A 0.0000
328 S A -1.2737
329 G A -1.9033
330 G A -1.7877
331 P A -1.4906
332 Q A -1.8711
333 A A -0.9772
334 N A -0.5573
335 L A 0.6956
336 H A -0.0438
337 D A -0.2430
338 A A -0.6200
339 C A -0.6044
340 Q A 0.0000
341 G A 0.0000
342 D A 0.0000
343 S A -0.0898
344 G A 0.0000
345 G A 0.0000
346 P A 0.0000
347 L A 0.0000
348 V A 0.0000
349 C A 0.0000
350 L A -1.2604
351 N A 0.0000
352 D A -2.5380
353 G A -1.8041
354 R A -1.4482
355 M A 0.0000
356 T A 0.0000
357 L A 0.0000
358 V A -0.0045
359 G A 0.0000
360 I A 0.0000
361 I A 0.0000
362 S A -0.3167
363 W A -0.1757
364 G A -0.3200
365 L A 0.3651
366 G A -0.3553
367 C A 0.0000
368 G A -1.2180
369 Q A -1.7692
370 K A -1.2473
371 D A -1.7849
372 V A 0.0000
373 P A 0.0000
374 G A 0.0000
375 V A 0.0000
376 Y A 0.0000
377 T A 0.0000
378 K A -0.4019
379 V A 0.0000
380 T A 0.0000
381 N A 0.0000
382 Y A 0.0000
383 L A 0.0000
384 D A -1.5127
385 W A 0.0000
386 I A 0.0000
387 R A -2.9048
388 D A -3.1396
389 N A -2.1021
390 M A 0.0000
391 R A -2.8495

 

Laboratory of Theory of Biopolymers 2015