| Chain sequence(s) |
A: PALPEDGGSGAFPPGHFKDPKRLYCKNGGFFLRIHPDGRVDGVREKSDPHIKLQLQAEERGVVSIKGVCANRYLAMKEDGRLLASKCVTDECFFFERLESNNYNTYRSRKYSSWYVALKRTGQYKLGPKTGPGQKAILFLPMSAKSHHHHHH
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:46)
[INFO] Main: Simulation completed successfully. (00:03:47)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | P | A | 0.1214 | |
| 2 | A | A | 0.3757 | |
| 3 | L | A | 0.7285 | |
| 4 | P | A | -0.9760 | |
| 5 | E | A | -2.6060 | |
| 6 | D | A | -2.9035 | |
| 7 | G | A | -2.2463 | |
| 8 | G | A | -1.5940 | |
| 9 | S | A | -0.6417 | |
| 10 | G | A | -0.1684 | |
| 11 | A | A | 0.5015 | |
| 12 | F | A | 1.4709 | |
| 13 | P | A | 0.5447 | |
| 14 | P | A | 0.0542 | |
| 15 | G | A | 0.0000 | |
| 16 | H | A | -0.6280 | |
| 17 | F | A | 0.2970 | |
| 18 | K | A | -1.4772 | |
| 19 | D | A | -1.3822 | |
| 20 | P | A | -1.2359 | |
| 21 | K | A | -1.0129 | |
| 22 | R | A | -0.9905 | |
| 23 | L | A | 0.0000 | |
| 24 | Y | A | -0.2557 | |
| 25 | C | A | 0.0000 | |
| 26 | K | A | -1.4796 | |
| 27 | N | A | 0.0000 | |
| 28 | G | A | -1.6830 | |
| 29 | G | A | -1.1247 | |
| 30 | F | A | 0.0000 | |
| 31 | F | A | 0.0000 | |
| 32 | L | A | 0.0000 | |
| 33 | R | A | -1.1723 | |
| 34 | I | A | 0.0000 | |
| 35 | H | A | -1.7539 | |
| 36 | P | A | -1.9131 | |
| 37 | D | A | -2.6956 | |
| 38 | G | A | -2.2762 | |
| 39 | R | A | -2.6084 | |
| 40 | V | A | 0.0000 | |
| 41 | D | A | -1.2361 | |
| 42 | G | A | -1.3989 | |
| 43 | V | A | -1.8608 | |
| 44 | R | A | -3.1743 | |
| 45 | E | A | -3.6435 | |
| 46 | K | A | -3.3321 | |
| 47 | S | A | -2.1114 | |
| 48 | D | A | -1.8920 | |
| 49 | P | A | -0.8468 | |
| 50 | H | A | -0.6745 | |
| 51 | I | A | 0.0000 | |
| 52 | K | A | -1.0773 | |
| 53 | L | A | 0.0000 | |
| 54 | Q | A | -0.8115 | |
| 55 | L | A | -0.6964 | |
| 56 | Q | A | -1.2455 | |
| 57 | A | A | -1.5406 | |
| 58 | E | A | -2.0159 | |
| 59 | E | A | -3.1285 | |
| 60 | R | A | -3.0120 | |
| 61 | G | A | -1.8291 | |
| 62 | V | A | 0.0000 | |
| 63 | V | A | 0.0000 | |
| 64 | S | A | 0.0000 | |
| 65 | I | A | 0.0000 | |
| 66 | K | A | -0.8208 | |
| 67 | G | A | 0.0000 | |
| 68 | V | A | 0.3000 | |
| 69 | C | A | 0.3142 | |
| 70 | A | A | -1.0101 | |
| 71 | N | A | -1.4191 | |
| 72 | R | A | -1.4119 | |
| 73 | Y | A | -0.3878 | |
| 74 | L | A | 0.0000 | |
| 75 | A | A | 0.0000 | |
| 76 | M | A | 0.0000 | |
| 77 | K | A | -2.8335 | |
| 78 | E | A | -3.3199 | |
| 79 | D | A | -2.7132 | |
| 80 | G | A | 0.0000 | |
| 81 | R | A | -2.5903 | |
| 82 | L | A | 0.0000 | |
| 83 | L | A | -1.0849 | |
| 84 | A | A | 0.0000 | |
| 85 | S | A | -1.1023 | |
| 86 | K | A | -1.7957 | |
| 87 | C | A | 0.1154 | |
| 88 | V | A | 0.7855 | |
| 89 | T | A | 0.0242 | |
| 90 | D | A | -1.1531 | |
| 91 | E | A | -1.3586 | |
| 92 | C | A | 0.0000 | |
| 93 | F | A | -0.8044 | |
| 94 | F | A | 0.0000 | |
| 95 | F | A | -1.0780 | |
| 96 | E | A | -0.9323 | |
| 97 | R | A | -0.7939 | |
| 98 | L | A | 0.1734 | |
| 99 | E | A | -0.9816 | |
| 100 | S | A | -1.0398 | |
| 101 | N | A | -1.4124 | |
| 102 | N | A | -1.5079 | |
| 103 | Y | A | -0.8146 | |
| 104 | N | A | -0.4004 | |
| 105 | T | A | 0.0000 | |
| 106 | Y | A | 0.0000 | |
| 107 | R | A | -1.0904 | |
| 108 | S | A | 0.0000 | |
| 109 | R | A | -1.4743 | |
| 110 | K | A | -2.2949 | |
| 111 | Y | A | -1.3708 | |
| 112 | S | A | -0.8772 | |
| 113 | S | A | -0.8268 | |
| 114 | W | A | -0.7325 | |
| 115 | Y | A | 0.0000 | |
| 116 | V | A | 0.0000 | |
| 117 | A | A | 0.0000 | |
| 118 | L | A | 0.0000 | |
| 119 | K | A | -2.5048 | |
| 120 | R | A | -2.8497 | |
| 121 | T | A | -1.7051 | |
| 122 | G | A | 0.0000 | |
| 123 | Q | A | -1.8605 | |
| 124 | Y | A | -1.4865 | |
| 125 | K | A | -1.4667 | |
| 126 | L | A | -1.2952 | |
| 127 | G | A | 0.0000 | |
| 128 | P | A | -1.3990 | |
| 129 | K | A | -1.6898 | |
| 130 | T | A | 0.0000 | |
| 131 | G | A | -1.0099 | |
| 132 | P | A | -0.8509 | |
| 133 | G | A | -1.0413 | |
| 134 | Q | A | -1.4006 | |
| 135 | K | A | -1.9436 | |
| 136 | A | A | 0.0000 | |
| 137 | I | A | 0.0000 | |
| 138 | L | A | 0.0000 | |
| 139 | F | A | 0.0000 | |
| 140 | L | A | 0.1022 | |
| 141 | P | A | -0.0227 | |
| 142 | M | A | -0.1973 | |
| 143 | S | A | -1.0818 | |
| 144 | A | A | -1.7697 | |
| 145 | K | A | -2.4920 | |
| 146 | S | A | -2.0318 | |
| 147 | H | A | -2.5278 | |
| 148 | H | A | -2.7336 | |
| 149 | H | A | -2.7130 | |
| 150 | H | A | -2.6702 | |
| 151 | H | A | -2.3911 | |
| 152 | H | A | -1.8846 |