| Chain sequence(s) |
A: KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:42)
[INFO] Main: Simulation completed successfully. (00:01:43)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | K | A | -1.3422 | |
| 2 | V | A | 0.2896 | |
| 3 | F | A | 0.0000 | |
| 4 | G | A | -0.9707 | |
| 5 | R | A | -1.1724 | |
| 6 | C | A | -1.0599 | |
| 7 | E | A | -1.3608 | |
| 8 | L | A | 0.0000 | |
| 9 | A | A | 0.0000 | |
| 10 | A | A | -1.0756 | |
| 11 | A | A | -1.2666 | |
| 12 | M | A | 0.0000 | |
| 13 | K | A | -1.9419 | |
| 14 | R | A | -2.3777 | |
| 15 | H | A | -1.9311 | |
| 16 | G | A | -1.8348 | |
| 17 | L | A | 0.0000 | |
| 18 | D | A | -2.2468 | |
| 19 | N | A | -2.2962 | |
| 20 | Y | A | -1.7456 | |
| 21 | R | A | -2.3829 | |
| 22 | G | A | -1.8265 | |
| 23 | Y | A | -1.2577 | |
| 24 | S | A | -1.3573 | |
| 25 | L | A | 0.0000 | |
| 26 | G | A | 0.0000 | |
| 27 | N | A | -0.8660 | |
| 28 | W | A | 0.0000 | |
| 29 | V | A | 0.0000 | |
| 30 | C | A | 0.0000 | |
| 31 | A | A | 0.0000 | |
| 32 | A | A | 0.0000 | |
| 33 | K | A | -1.0043 | |
| 34 | F | A | -0.4267 | |
| 35 | E | A | -0.3847 | |
| 36 | S | A | 0.0000 | |
| 37 | N | A | -1.3070 | |
| 38 | F | A | 0.0000 | |
| 39 | N | A | -1.0368 | |
| 40 | T | A | 0.0000 | |
| 41 | Q | A | -1.3910 | |
| 42 | A | A | -1.1957 | |
| 43 | T | A | -1.5686 | |
| 44 | N | A | -2.4501 | |
| 45 | R | A | -3.0594 | |
| 46 | N | A | -2.4157 | |
| 47 | T | A | -1.4790 | |
| 48 | D | A | -2.2679 | |
| 49 | G | A | -1.9666 | |
| 50 | S | A | 0.0000 | |
| 51 | T | A | 0.0000 | |
| 52 | D | A | -1.6099 | |
| 53 | Y | A | 0.0000 | |
| 54 | G | A | 0.0000 | |
| 55 | I | A | 0.0000 | |
| 56 | L | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | I | A | 0.0000 | |
| 59 | N | A | -1.5474 | |
| 60 | S | A | 0.0000 | |
| 61 | R | A | -2.5172 | |
| 62 | W | A | -0.9936 | |
| 63 | W | A | -1.1526 | |
| 64 | C | A | 0.0000 | |
| 65 | N | A | -2.7798 | |
| 66 | D | A | -2.1365 | |
| 67 | G | A | -1.9404 | |
| 68 | R | A | -2.4881 | |
| 69 | T | A | -2.2497 | |
| 70 | P | A | -1.6849 | |
| 71 | G | A | -1.4239 | |
| 72 | S | A | -2.1988 | |
| 73 | R | A | -2.6264 | |
| 74 | N | A | -2.1028 | |
| 75 | L | A | -0.9237 | |
| 76 | C | A | -1.1253 | |
| 77 | N | A | -1.6001 | |
| 78 | I | A | -0.8023 | |
| 79 | P | A | -1.1346 | |
| 80 | C | A | 0.0000 | |
| 81 | S | A | -0.6061 | |
| 82 | A | A | -0.4290 | |
| 83 | L | A | 0.0000 | |
| 84 | L | A | -0.9441 | |
| 85 | S | A | -1.3094 | |
| 86 | S | A | -1.5571 | |
| 87 | D | A | -2.1008 | |
| 88 | I | A | 0.0000 | |
| 89 | T | A | -1.0164 | |
| 90 | A | A | -0.7277 | |
| 91 | S | A | 0.0000 | |
| 92 | V | A | 0.0000 | |
| 93 | N | A | -1.7290 | |
| 94 | C | A | 0.0000 | |
| 95 | A | A | 0.0000 | |
| 96 | K | A | -1.8362 | |
| 97 | K | A | -2.0604 | |
| 98 | I | A | 0.0000 | |
| 99 | V | A | 0.0000 | |
| 100 | S | A | -2.1819 | |
| 101 | D | A | -2.7426 | |
| 102 | G | A | -2.1769 | |
| 103 | N | A | -2.1861 | |
| 104 | G | A | -1.8928 | |
| 105 | M | A | 0.0000 | |
| 106 | N | A | -1.4695 | |
| 107 | A | A | -0.6469 | |
| 108 | W | A | 0.0000 | |
| 109 | V | A | 0.4366 | |
| 110 | A | A | -0.9440 | |
| 111 | W | A | 0.0000 | |
| 112 | R | A | -3.0882 | |
| 113 | N | A | -3.0059 | |
| 114 | R | A | -3.0375 | |
| 115 | C | A | 0.0000 | |
| 116 | K | A | -3.3929 | |
| 117 | G | A | -2.2460 | |
| 118 | T | A | -2.1176 | |
| 119 | D | A | -2.2754 | |
| 120 | V | A | -1.7412 | |
| 121 | Q | A | -1.6632 | |
| 122 | A | A | -1.3408 | |
| 123 | W | A | -0.8891 | |
| 124 | I | A | -1.0157 | |
| 125 | R | A | -2.2359 | |
| 126 | G | A | -1.3936 | |
| 127 | C | A | -1.2478 | |
| 128 | R | A | -1.4810 | |
| 129 | L | A | 0.1360 |