| Chain sequence(s) |
A: MFPAMPLSSLFVNGPRTLCGAELVDALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMYCAPLKPAKSAHHHHHH
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:20)
[INFO] Main: Simulation completed successfully. (00:01:21)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.9444 | |
| 2 | F | A | 2.4878 | |
| 3 | P | A | 1.2851 | |
| 4 | A | A | 1.2846 | |
| 5 | M | A | 1.6152 | |
| 6 | P | A | 0.9166 | |
| 7 | L | A | 1.8319 | |
| 8 | S | A | 1.3259 | |
| 9 | S | A | 1.6287 | |
| 10 | L | A | 2.9079 | |
| 11 | F | A | 2.7464 | |
| 12 | V | A | 2.0397 | |
| 13 | N | A | -0.3500 | |
| 14 | G | A | -0.8500 | |
| 15 | P | A | -1.6340 | |
| 16 | R | A | -2.0154 | |
| 17 | T | A | -0.5841 | |
| 18 | L | A | 0.0000 | |
| 19 | C | A | 0.6163 | |
| 20 | G | A | -0.3018 | |
| 21 | A | A | -0.9721 | |
| 22 | E | A | -1.6035 | |
| 23 | L | A | 0.0000 | |
| 24 | V | A | -0.5359 | |
| 25 | D | A | -1.8912 | |
| 26 | A | A | 0.0000 | |
| 27 | L | A | 0.0000 | |
| 28 | Q | A | -1.3380 | |
| 29 | F | A | 0.6098 | |
| 30 | V | A | -0.0947 | |
| 31 | C | A | 0.0000 | |
| 32 | G | A | -1.4032 | |
| 33 | D | A | -2.0382 | |
| 34 | R | A | -1.5844 | |
| 35 | G | A | -0.6708 | |
| 36 | F | A | 0.0013 | |
| 37 | Y | A | 0.6616 | |
| 38 | F | A | 0.6930 | |
| 39 | N | A | -1.3258 | |
| 40 | K | A | -1.5889 | |
| 41 | P | A | -1.1204 | |
| 42 | T | A | -0.9187 | |
| 43 | G | A | -0.5353 | |
| 44 | Y | A | 0.2444 | |
| 45 | G | A | -0.2519 | |
| 46 | S | A | -0.5930 | |
| 47 | S | A | -1.1962 | |
| 48 | S | A | -1.8328 | |
| 49 | R | A | -2.9476 | |
| 50 | R | A | -3.0656 | |
| 51 | A | A | -1.8144 | |
| 52 | P | A | -1.6607 | |
| 53 | Q | A | -2.1737 | |
| 54 | T | A | -1.0883 | |
| 55 | G | A | -0.8836 | |
| 56 | I | A | 0.0000 | |
| 57 | V | A | 0.4380 | |
| 58 | D | A | -0.2402 | |
| 59 | E | A | -0.6876 | |
| 60 | C | A | 0.0000 | |
| 61 | C | A | 0.0653 | |
| 62 | F | A | 0.7631 | |
| 63 | R | A | -1.4509 | |
| 64 | S | A | -1.5541 | |
| 65 | C | A | -1.6480 | |
| 66 | D | A | -2.3903 | |
| 67 | L | A | -1.0696 | |
| 68 | R | A | -2.3208 | |
| 69 | R | A | -1.9723 | |
| 70 | L | A | 0.0000 | |
| 71 | E | A | -1.0767 | |
| 72 | M | A | -0.1330 | |
| 73 | Y | A | 0.0000 | |
| 74 | C | A | 0.0000 | |
| 75 | A | A | 0.0000 | |
| 76 | P | A | -0.0867 | |
| 77 | L | A | -0.2009 | |
| 78 | K | A | -1.5505 | |
| 79 | P | A | -1.1385 | |
| 80 | A | A | -1.1841 | |
| 81 | K | A | -2.1800 | |
| 82 | S | A | -1.6307 | |
| 83 | A | A | -1.6923 | |
| 84 | H | A | -2.2983 | |
| 85 | H | A | -2.3178 | |
| 86 | H | A | -2.6303 | |
| 87 | H | A | -2.5682 | |
| 88 | H | A | -2.4182 | |
| 89 | H | A | -1.8700 |