| Chain sequence(s) |
A: ALDTNYCFSSTEKNCCVRQLYIDFRKDLGWKWIHEPKGYHANFCLGPCPYIWSLDTQYSKVLALYNQHNPGASAAPCCVPQALEPLPIVYYVGRKPKVEQLSNMIVRSCKCSHHHHHH
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:13)
[INFO] Main: Simulation completed successfully. (00:02:14)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | 0.4376 | |
| 2 | L | A | 1.1287 | |
| 3 | D | A | -0.5963 | |
| 4 | T | A | -0.2005 | |
| 5 | N | A | -0.9453 | |
| 6 | Y | A | -0.3654 | |
| 7 | C | A | 0.0000 | |
| 8 | F | A | 1.2519 | |
| 9 | S | A | -0.0114 | |
| 10 | S | A | -0.6831 | |
| 11 | T | A | -1.2225 | |
| 12 | E | A | -2.1881 | |
| 13 | K | A | -2.5387 | |
| 14 | N | A | -1.3406 | |
| 15 | C | A | -0.0719 | |
| 16 | C | A | -0.0414 | |
| 17 | V | A | 0.0000 | |
| 18 | R | A | 0.0021 | |
| 19 | Q | A | -0.5044 | |
| 20 | L | A | 0.3952 | |
| 21 | Y | A | 0.4875 | |
| 22 | I | A | -0.5076 | |
| 23 | D | A | 0.0000 | |
| 24 | F | A | 0.0000 | |
| 25 | R | A | -3.6044 | |
| 26 | K | A | -3.4230 | |
| 27 | D | A | -2.1833 | |
| 28 | L | A | -1.1346 | |
| 29 | G | A | -1.7188 | |
| 30 | W | A | -1.5283 | |
| 31 | K | A | -2.1588 | |
| 32 | W | A | -0.1548 | |
| 33 | I | A | 0.0000 | |
| 34 | H | A | -2.2455 | |
| 35 | E | A | -2.4020 | |
| 36 | P | A | -2.1728 | |
| 37 | K | A | -3.2101 | |
| 38 | G | A | 0.0000 | |
| 39 | Y | A | 0.0000 | |
| 40 | H | A | -0.4522 | |
| 41 | A | A | 0.0000 | |
| 42 | N | A | 0.0000 | |
| 43 | F | A | 0.7319 | |
| 44 | C | A | 0.7003 | |
| 45 | L | A | 1.2864 | |
| 46 | G | A | -0.1929 | |
| 47 | P | A | -0.3400 | |
| 48 | C | A | 0.6519 | |
| 49 | P | A | 0.9334 | |
| 50 | Y | A | 2.2014 | |
| 51 | I | A | 3.0436 | |
| 52 | W | A | 2.2805 | |
| 53 | S | A | 0.0000 | |
| 54 | L | A | 1.5514 | |
| 55 | D | A | -0.5221 | |
| 56 | T | A | -0.2145 | |
| 57 | Q | A | -0.3919 | |
| 58 | Y | A | 0.9953 | |
| 59 | S | A | 0.0000 | |
| 60 | K | A | 1.0815 | |
| 61 | V | A | 2.0323 | |
| 62 | L | A | 1.2799 | |
| 63 | A | A | 0.0000 | |
| 64 | L | A | 1.5200 | |
| 65 | Y | A | 1.1045 | |
| 66 | N | A | -0.3700 | |
| 67 | Q | A | -1.1188 | |
| 68 | H | A | -1.4578 | |
| 69 | N | A | -1.4193 | |
| 70 | P | A | -1.2825 | |
| 71 | G | A | -1.1450 | |
| 72 | A | A | -0.7069 | |
| 73 | S | A | -0.4343 | |
| 74 | A | A | -0.1403 | |
| 75 | A | A | 0.0359 | |
| 76 | P | A | 0.1295 | |
| 77 | C | A | 0.6147 | |
| 78 | C | A | 0.8215 | |
| 79 | V | A | 0.4205 | |
| 80 | P | A | -0.4486 | |
| 81 | Q | A | -1.5559 | |
| 82 | A | A | -1.2406 | |
| 83 | L | A | -1.0329 | |
| 84 | E | A | -1.5266 | |
| 85 | P | A | -1.4232 | |
| 86 | L | A | 0.0000 | |
| 87 | P | A | -0.9207 | |
| 88 | I | A | 0.0000 | |
| 89 | V | A | -0.2882 | |
| 90 | Y | A | -0.1186 | |
| 91 | Y | A | 0.7309 | |
| 92 | V | A | 0.8797 | |
| 93 | G | A | -0.7317 | |
| 94 | R | A | -2.2654 | |
| 95 | K | A | -2.1260 | |
| 96 | P | A | -0.6817 | |
| 97 | K | A | -0.2555 | |
| 98 | V | A | 0.6274 | |
| 99 | E | A | -0.8531 | |
| 100 | Q | A | -1.5542 | |
| 101 | L | A | -0.9651 | |
| 102 | S | A | -1.2397 | |
| 103 | N | A | -1.6021 | |
| 104 | M | A | -0.9311 | |
| 105 | I | A | -0.5832 | |
| 106 | V | A | 0.0000 | |
| 107 | R | A | -2.2592 | |
| 108 | S | A | -1.2976 | |
| 109 | C | A | -0.4286 | |
| 110 | K | A | -0.0803 | |
| 111 | C | A | 0.0000 | |
| 112 | S | A | -0.2243 | |
| 113 | H | A | -0.8123 | |
| 114 | H | A | -1.8221 | |
| 115 | H | A | -2.4544 | |
| 116 | H | A | -2.5702 | |
| 117 | H | A | -2.4299 | |
| 118 | H | A | -1.9125 |