Project name: TGF

Status: done

Started: 2025-11-12 06:25:53
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Chain sequence(s) A: ALDTNYCFSSTEKNCCVRQLYIDFRKDLGWKWIHEPKGYHANFCLGPCPYIWSLDTQYSKVLALYNQHNPGASAAPCCVPQALEPLPIVYYVGRKPKVEQLSNMIVRSCKCSHHHHHH
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:13)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:14)
Show buried residues

Minimal score value
-3.6044
Maximal score value
3.0436
Average score
-0.4798
Total score value
-56.6202

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A 0.4376
2 L A 1.1287
3 D A -0.5963
4 T A -0.2005
5 N A -0.9453
6 Y A -0.3654
7 C A 0.0000
8 F A 1.2519
9 S A -0.0114
10 S A -0.6831
11 T A -1.2225
12 E A -2.1881
13 K A -2.5387
14 N A -1.3406
15 C A -0.0719
16 C A -0.0414
17 V A 0.0000
18 R A 0.0021
19 Q A -0.5044
20 L A 0.3952
21 Y A 0.4875
22 I A -0.5076
23 D A 0.0000
24 F A 0.0000
25 R A -3.6044
26 K A -3.4230
27 D A -2.1833
28 L A -1.1346
29 G A -1.7188
30 W A -1.5283
31 K A -2.1588
32 W A -0.1548
33 I A 0.0000
34 H A -2.2455
35 E A -2.4020
36 P A -2.1728
37 K A -3.2101
38 G A 0.0000
39 Y A 0.0000
40 H A -0.4522
41 A A 0.0000
42 N A 0.0000
43 F A 0.7319
44 C A 0.7003
45 L A 1.2864
46 G A -0.1929
47 P A -0.3400
48 C A 0.6519
49 P A 0.9334
50 Y A 2.2014
51 I A 3.0436
52 W A 2.2805
53 S A 0.0000
54 L A 1.5514
55 D A -0.5221
56 T A -0.2145
57 Q A -0.3919
58 Y A 0.9953
59 S A 0.0000
60 K A 1.0815
61 V A 2.0323
62 L A 1.2799
63 A A 0.0000
64 L A 1.5200
65 Y A 1.1045
66 N A -0.3700
67 Q A -1.1188
68 H A -1.4578
69 N A -1.4193
70 P A -1.2825
71 G A -1.1450
72 A A -0.7069
73 S A -0.4343
74 A A -0.1403
75 A A 0.0359
76 P A 0.1295
77 C A 0.6147
78 C A 0.8215
79 V A 0.4205
80 P A -0.4486
81 Q A -1.5559
82 A A -1.2406
83 L A -1.0329
84 E A -1.5266
85 P A -1.4232
86 L A 0.0000
87 P A -0.9207
88 I A 0.0000
89 V A -0.2882
90 Y A -0.1186
91 Y A 0.7309
92 V A 0.8797
93 G A -0.7317
94 R A -2.2654
95 K A -2.1260
96 P A -0.6817
97 K A -0.2555
98 V A 0.6274
99 E A -0.8531
100 Q A -1.5542
101 L A -0.9651
102 S A -1.2397
103 N A -1.6021
104 M A -0.9311
105 I A -0.5832
106 V A 0.0000
107 R A -2.2592
108 S A -1.2976
109 C A -0.4286
110 K A -0.0803
111 C A 0.0000
112 S A -0.2243
113 H A -0.8123
114 H A -1.8221
115 H A -2.4544
116 H A -2.5702
117 H A -2.4299
118 H A -1.9125
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Laboratory of Theory of Biopolymers 2018