| Chain sequence(s) |
A: CKLKGQSCRKTSYDCCSGSCGRSGKC
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:02)
[INFO] Main: Simulation completed successfully. (00:01:03)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | 0.6455 | |
| 2 | K | A | -0.2641 | |
| 3 | L | A | 0.0420 | |
| 4 | K | A | -1.8560 | |
| 5 | G | A | -2.0141 | |
| 6 | Q | A | -2.3095 | |
| 7 | S | A | -2.4994 | |
| 8 | C | A | -2.7076 | |
| 9 | R | A | -3.5186 | |
| 10 | K | A | -3.4185 | |
| 11 | T | A | -1.5006 | |
| 12 | S | A | -1.3075 | |
| 13 | Y | A | -0.5415 | |
| 14 | D | A | -1.4380 | |
| 15 | C | A | 0.0000 | |
| 16 | C | A | 0.6187 | |
| 17 | S | A | 0.0077 | |
| 18 | G | A | -0.2579 | |
| 19 | S | A | -1.4212 | |
| 20 | C | A | 0.0000 | |
| 21 | G | A | -2.7379 | |
| 22 | R | A | -3.5472 | |
| 23 | S | A | -2.3334 | |
| 24 | G | A | -2.8743 | |
| 25 | K | A | -3.5423 | |
| 26 | C | A | 0.0000 |