Project name: query_structure

Status: done

Started: 2026-03-16 23:00:40
Settings
Chain sequence(s) A: CKLKGQSCRKTSYDCCSGSCGRSGKC
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:02)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:02)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:02)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:03)
Show buried residues

Minimal score value
-3.5472
Maximal score value
0.6455
Average score
-1.4914
Total score value
-38.7757

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 C A 0.6455
2 K A -0.2641
3 L A 0.0420
4 K A -1.8560
5 G A -2.0141
6 Q A -2.3095
7 S A -2.4994
8 C A -2.7076
9 R A -3.5186
10 K A -3.4185
11 T A -1.5006
12 S A -1.3075
13 Y A -0.5415
14 D A -1.4380
15 C A 0.0000
16 C A 0.6187
17 S A 0.0077
18 G A -0.2579
19 S A -1.4212
20 C A 0.0000
21 G A -2.7379
22 R A -3.5472
23 S A -2.3334
24 G A -2.8743
25 K A -3.5423
26 C A 0.0000
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Laboratory of Theory of Biopolymers 2018