Chain sequence(s) |
A: QVQLVESGGGLVQPGGSLRLSCAASGELDAPFSKYSLGWFRQAPGQGLEAVAAIDAETGKTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAANPSSAYDPLSPSQYDYWGQGTLVTVSS
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:01) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01) [INFO] runJob: Creating pdb object from: input.pdb (00:00:01) [INFO] FoldX: Starting FoldX energy minimalization (00:00:01) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:49) [INFO] Main: Simulation completed successfully. (00:01:50) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | A | -2.3385 | |
2 | V | A | -1.9953 | |
3 | Q | A | -1.5421 | |
4 | L | A | 0.0000 | |
5 | V | A | 0.3177 | |
6 | E | A | 0.0235 | |
7 | S | A | -0.4449 | |
8 | G | A | -0.9340 | |
9 | G | A | -0.0098 | |
10 | G | A | 0.6351 | |
11 | L | A | 1.4088 | |
12 | V | A | -0.1238 | |
13 | Q | A | -1.4401 | |
14 | P | A | -1.8051 | |
15 | G | A | -1.5272 | |
16 | G | A | -1.0139 | |
17 | S | A | -1.3164 | |
18 | L | A | -0.9267 | |
19 | R | A | -2.1757 | |
20 | L | A | 0.0000 | |
21 | S | A | -0.6395 | |
22 | C | A | 0.0000 | |
23 | A | A | -0.4472 | |
24 | A | A | 0.0000 | |
25 | S | A | -1.2498 | |
26 | G | A | -2.1201 | |
27 | E | A | -2.8721 | |
28 | L | A | -1.9430 | |
29 | D | A | -2.4860 | |
30 | A | A | -1.5613 | |
31 | P | A | -1.2708 | |
32 | F | A | 0.0000 | |
33 | S | A | -1.8817 | |
34 | K | A | -2.7041 | |
35 | Y | A | 0.0000 | |
36 | S | A | 0.0000 | |
37 | L | A | 0.0000 | |
38 | G | A | 0.0000 | |
39 | W | A | 0.0000 | |
40 | F | A | 0.0000 | |
41 | R | A | 0.0000 | |
42 | Q | A | -0.6122 | |
43 | A | A | -0.9398 | |
44 | P | A | -0.9808 | |
45 | G | A | -1.2509 | |
46 | Q | A | -1.7667 | |
47 | G | A | -1.0669 | |
48 | L | A | -0.1013 | |
49 | E | A | -0.6587 | |
50 | A | A | -0.2513 | |
51 | V | A | 0.0000 | |
52 | A | A | 0.0000 | |
53 | A | A | 0.0000 | |
54 | I | A | 0.0000 | |
55 | D | A | 0.0000 | |
56 | A | A | 0.0000 | |
57 | E | A | -2.6758 | |
58 | T | A | -1.8533 | |
59 | G | A | -1.8876 | |
60 | K | A | -2.0538 | |
61 | T | A | -0.6463 | |
62 | Y | A | -0.2812 | |
63 | Y | A | -0.5053 | |
64 | A | A | -1.2100 | |
65 | D | A | -2.4493 | |
66 | S | A | -1.8039 | |
67 | V | A | 0.0000 | |
68 | K | A | -2.5612 | |
69 | G | A | -1.7559 | |
70 | R | A | -1.5213 | |
71 | F | A | 0.0000 | |
72 | T | A | -0.7633 | |
73 | I | A | 0.0000 | |
74 | S | A | -0.8060 | |
75 | R | A | -1.4199 | |
76 | D | A | -2.0437 | |
77 | N | A | -2.5924 | |
78 | S | A | -1.9344 | |
79 | K | A | -2.5890 | |
80 | N | A | -1.9599 | |
81 | T | A | 0.0000 | |
82 | L | A | 0.0000 | |
83 | Y | A | -0.7103 | |
84 | L | A | 0.0000 | |
85 | Q | A | -1.2559 | |
86 | M | A | 0.0000 | |
87 | N | A | -1.5145 | |
88 | S | A | -1.3871 | |
89 | L | A | 0.0000 | |
90 | R | A | -2.9125 | |
91 | A | A | -2.0228 | |
92 | E | A | -2.4646 | |
93 | D | A | 0.0000 | |
94 | T | A | -0.5178 | |
95 | A | A | 0.0000 | |
96 | V | A | 0.8353 | |
97 | Y | A | 0.0000 | |
98 | Y | A | 0.2711 | |
99 | C | A | 0.0000 | |
100 | A | A | 0.0000 | |
101 | A | A | 0.0000 | |
102 | N | A | -1.1199 | |
103 | P | A | -1.3823 | |
104 | S | A | -0.9789 | |
105 | S | A | -0.9807 | |
106 | A | A | 0.0000 | |
107 | Y | A | 0.6021 | |
108 | D | A | -0.6590 | |
109 | P | A | 0.0000 | |
110 | L | A | 0.0882 | |
111 | S | A | -0.2752 | |
112 | P | A | -0.4984 | |
113 | S | A | -0.8304 | |
114 | Q | A | -0.8932 | |
115 | Y | A | 0.0000 | |
116 | D | A | -1.7760 | |
117 | Y | A | -0.8988 | |
118 | W | A | -0.2528 | |
119 | G | A | -0.3284 | |
120 | Q | A | -1.0272 | |
121 | G | A | -0.0647 | |
122 | T | A | 0.4781 | |
123 | L | A | 1.6851 | |
124 | V | A | 0.0000 | |
125 | T | A | 0.3191 | |
126 | V | A | 0.0000 | |
127 | S | A | -0.7398 | |
128 | S | A | -0.4845 |