Project name: hu1F5 ABB

Status: done

Started: 2025-07-16 06:58:34
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Chain sequence(s) H: QVQLQESGPGLVKPSQTLSLTCSVTGYSITSDYYWNWIRQPPGNGLEWMGYVTYDGSNNYNPSLKNRISISVDSSKNQFFLKLNSVTAADTATYYCARFGSSYWAMDYWGQGTSVTVSS
L: QIVLTQPPSILSASPGESATLTCTLRSSVSYIYWYQQKPGSPPKYLLMSTSEQGSGVPSRFSGSKSANAGILLISGLQSEDEADYYCHQWYSYPWTFGGGTKLTVL
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:48)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:49)
Show buried residues

Minimal score value
-2.5619
Maximal score value
1.7296
Average score
-0.4648
Total score value
-104.5764

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.4421
2 V H -1.0063
3 Q H -1.7459
4 L H 0.0000
5 Q H -1.7933
6 E H 0.0000
7 S H -0.7821
8 G H -0.5611
9 P H -0.3184
11 G H -0.2042
12 L H 0.1541
13 V H 0.0000
14 K H -1.4834
15 P H -1.3017
16 S H -1.4528
17 Q H -2.0093
18 T H -1.7152
19 L H 0.0000
20 S H -0.8729
21 L H 0.0000
22 T H -0.4014
23 C H 0.0000
24 S H -1.1668
25 V H 0.0000
26 T H -1.1957
27 G H -0.8903
28 Y H -0.4546
29 S H -0.4537
30 I H 0.0000
31 T H -0.4807
35 S H -0.6339
36 D H -1.1658
37 Y H -0.3312
38 Y H -0.1504
39 W H 0.0000
40 N H 0.0000
41 W H 0.0000
42 I H 0.0000
43 R H 0.0000
44 Q H 0.0000
45 P H -0.6841
46 P H -0.8144
47 G H -1.0821
48 N H -1.5005
49 G H -1.2414
50 L H 0.0000
51 E H -0.6158
52 W H 0.0000
53 M H 0.0000
54 G H 0.0000
55 Y H 0.0000
56 V H 0.0000
57 T H 0.0000
58 Y H -0.4726
59 D H -1.7863
63 G H -1.2413
64 S H -1.1893
65 N H -1.3077
66 N H -0.8095
67 Y H -0.8564
68 N H -0.9777
69 P H -1.2714
70 S H -1.0296
71 L H 0.0000
72 K H -2.5619
74 N H -2.5215
75 R H -2.2420
76 I H 0.0000
77 S H -1.2985
78 I H 0.0000
79 S H -0.3388
80 V H -0.3196
81 D H -1.0471
82 S H -1.0145
83 S H -1.3340
84 K H -2.1989
85 N H -1.5283
86 Q H -1.2035
87 F H 0.0000
88 F H -0.0601
89 L H 0.0000
90 K H -1.3344
91 L H 0.0000
92 N H -2.2972
93 S H -1.7215
94 V H 0.0000
95 T H -0.6635
96 A H -0.2031
97 A H 0.0200
98 D H 0.0000
99 T H -0.0528
100 A H 0.0000
101 T H -0.4215
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H 0.0000
107 F H 0.0000
108 G H 0.0000
109 S H 0.0518
110 S H 0.3191
112 Y H 0.9146
113 W H 0.7466
114 A H 0.1322
115 M H 0.0000
116 D H -1.2943
117 Y H -1.1601
118 W H 0.0000
119 G H -1.2764
120 Q H -1.7203
121 G H 0.0000
122 T H -0.7124
123 S H -0.2829
124 V H 0.0000
125 T H -0.1058
126 V H 0.0000
127 S H -0.4599
128 S H -0.5828
1 Q L -0.5794
2 I L 0.2230
3 V L 0.9572
4 L L 0.0000
5 T L -0.2023
6 Q L 0.0000
7 P L -0.1661
8 P L 0.2607
9 S L 0.3837
10 I L 1.7296
11 L L 1.1914
12 S L 0.8638
13 A L 0.1960
14 S L -0.4420
15 P L -1.2408
16 G L -1.7230
17 E L -2.3076
18 S L -1.2416
19 A L 0.0000
20 T L 0.0124
21 L L 0.0000
22 T L 0.2223
23 C L 0.0000
24 T L -0.5822
25 L L 0.0000
26 R L -1.6861
27 S L -1.2094
28 S L -0.9346
29 V L 0.1025
37 S L 0.4545
38 Y L 1.1853
39 I L 0.0000
40 Y L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L 0.0000
44 Q L 0.0000
45 K L -1.7496
46 P L -1.1020
47 G L -0.9895
48 S L -1.0551
49 P L -0.8514
50 P L 0.0000
51 K L -1.2386
52 Y L -0.5750
53 L L 0.0000
54 L L 0.0000
55 M L 0.0000
56 S L -0.1077
57 T L 0.0000
65 S L -1.2379
66 E L -1.9335
67 Q L -1.6829
68 G L 0.0000
69 S L -0.7266
70 G L -0.6010
71 V L -0.4622
72 P L -0.4055
74 S L -0.5445
75 R L -0.5156
76 F L 0.0000
77 S L -0.3872
78 G L -0.5667
79 S L -0.8654
80 K L -1.6339
83 S L -0.8534
84 A L -0.9803
85 N L -1.9762
86 A L -0.9406
87 G L 0.0000
88 I L 0.3210
89 L L 0.0000
90 L L 0.2352
91 I L 0.0000
92 S L -0.8914
93 G L -1.4038
94 L L 0.0000
95 Q L -2.0397
96 S L -1.6260
97 E L -2.4561
98 D L 0.0000
99 E L -1.6156
100 A L 0.0000
101 D L -0.8923
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 H L 0.0000
106 Q L 0.0000
107 W L 1.0386
108 Y L 1.6480
109 S L 0.7959
114 Y L 0.5795
115 P L 0.0000
116 W L 0.0000
117 T L 0.3072
118 F L 0.0000
119 G L -0.1746
120 G L -0.9598
121 G L -0.6815
122 T L 0.0000
123 K L -0.3170
124 L L 0.0000
125 T L 0.6750
126 V L 1.4807
127 L L 0.4278
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Laboratory of Theory of Biopolymers 2018