| Chain sequence(s) |
A: EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSAITWNSGHIDYADSVEGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAKVSYLSTASSLDYWGQGTLVTVSSASTKGPSVFPLTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSTQTYICNVNHKPSNT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:28)
[INFO] Main: Simulation completed successfully. (00:02:30)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -1.9403 | |
| 2 | V | A | -0.7118 | |
| 3 | Q | A | -0.7875 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 0.7434 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -0.3529 | |
| 8 | G | A | -0.9434 | |
| 9 | G | A | -0.6963 | |
| 10 | G | A | -0.3688 | |
| 11 | L | A | -0.2421 | |
| 12 | V | A | 0.0000 | |
| 13 | Q | A | -2.0207 | |
| 14 | P | A | -2.1431 | |
| 15 | G | A | -2.3491 | |
| 16 | R | A | -2.9288 | |
| 17 | S | A | -2.1594 | |
| 18 | L | A | -1.6077 | |
| 19 | R | A | -2.1361 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.4814 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.2420 | |
| 24 | A | A | -0.3960 | |
| 25 | S | A | -0.6745 | |
| 26 | G | A | -0.9349 | |
| 27 | F | A | -0.5735 | |
| 28 | T | A | -0.8882 | |
| 29 | F | A | 0.0000 | |
| 30 | D | A | -2.7149 | |
| 31 | D | A | -1.2645 | |
| 32 | Y | A | -0.1604 | |
| 33 | A | A | 0.0000 | |
| 34 | M | A | 0.0000 | |
| 35 | H | A | -0.0468 | |
| 36 | W | A | 0.0000 | |
| 37 | V | A | 0.0000 | |
| 38 | R | A | 0.0000 | |
| 39 | Q | A | -0.4317 | |
| 40 | A | A | -1.0868 | |
| 41 | P | A | -0.9936 | |
| 42 | G | A | -1.3643 | |
| 43 | K | A | -2.0463 | |
| 44 | G | A | -0.9312 | |
| 45 | L | A | 0.5487 | |
| 46 | E | A | -0.1811 | |
| 47 | W | A | 0.4107 | |
| 48 | V | A | 0.0000 | |
| 49 | S | A | 0.0000 | |
| 50 | A | A | -0.3433 | |
| 51 | I | A | 0.0000 | |
| 52 | T | A | 0.0000 | |
| 53 | W | A | -1.0906 | |
| 54 | N | A | -1.9228 | |
| 55 | S | A | -1.0063 | |
| 56 | G | A | -1.0691 | |
| 57 | H | A | -1.2168 | |
| 58 | I | A | -0.4058 | |
| 59 | D | A | -1.8409 | |
| 60 | Y | A | -1.5103 | |
| 61 | A | A | -1.6987 | |
| 62 | D | A | -2.6783 | |
| 63 | S | A | -1.6530 | |
| 64 | V | A | 0.0000 | |
| 65 | E | A | -2.9694 | |
| 66 | G | A | -1.8282 | |
| 67 | R | A | -1.2987 | |
| 68 | F | A | 0.0000 | |
| 69 | T | A | -0.9914 | |
| 70 | I | A | 0.0000 | |
| 71 | S | A | -0.3707 | |
| 72 | R | A | -1.2020 | |
| 73 | D | A | -1.8237 | |
| 74 | N | A | -2.2314 | |
| 75 | A | A | -1.6026 | |
| 76 | K | A | -2.4523 | |
| 77 | N | A | -2.1517 | |
| 78 | S | A | 0.0000 | |
| 79 | L | A | 0.0000 | |
| 80 | Y | A | -0.6098 | |
| 81 | L | A | 0.0000 | |
| 82 | Q | A | -1.5706 | |
| 83 | M | A | 0.0000 | |
| 84 | N | A | -2.3275 | |
| 85 | S | A | -1.8390 | |
| 86 | L | A | 0.0000 | |
| 87 | R | A | -2.7693 | |
| 88 | A | A | -1.8197 | |
| 89 | E | A | -2.2901 | |
| 90 | D | A | 0.0000 | |
| 91 | T | A | -0.8216 | |
| 92 | A | A | 0.0000 | |
| 93 | V | A | 0.2291 | |
| 94 | Y | A | 0.0000 | |
| 95 | Y | A | 0.2719 | |
| 96 | C | A | 0.0000 | |
| 97 | A | A | 0.0000 | |
| 98 | K | A | 0.0000 | |
| 99 | V | A | 0.0000 | |
| 100 | S | A | 0.3411 | |
| 101 | Y | A | 1.4226 | |
| 102 | L | A | 1.5048 | |
| 103 | S | A | 0.7040 | |
| 104 | T | A | 0.3142 | |
| 105 | A | A | 0.3114 | |
| 106 | S | A | 0.1929 | |
| 107 | S | A | -0.2799 | |
| 108 | L | A | -0.1653 | |
| 109 | D | A | -0.8873 | |
| 110 | Y | A | 0.5351 | |
| 111 | W | A | 0.6085 | |
| 112 | G | A | 0.1758 | |
| 113 | Q | A | -0.8306 | |
| 114 | G | A | 0.0000 | |
| 115 | T | A | -0.0194 | |
| 116 | L | A | 0.0551 | |
| 117 | V | A | 0.0000 | |
| 118 | T | A | -0.5114 | |
| 119 | V | A | 0.0000 | |
| 120 | S | A | -0.7031 | |
| 121 | S | A | -0.6918 | |
| 122 | A | A | -0.5229 | |
| 123 | S | A | -0.7197 | |
| 124 | T | A | -1.0164 | |
| 125 | K | A | -2.1397 | |
| 126 | G | A | -1.7576 | |
| 127 | P | A | -0.7206 | |
| 128 | S | A | 0.0183 | |
| 129 | V | A | 1.1728 | |
| 130 | F | A | 1.6484 | |
| 131 | P | A | 1.4608 | |
| 132 | L | A | 2.0083 | |
| 143 | T | A | -0.2460 | |
| 144 | A | A | -0.1266 | |
| 145 | A | A | 0.3928 | |
| 146 | L | A | 1.0500 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | L | A | 1.2037 | |
| 150 | V | A | 0.0000 | |
| 151 | K | A | -0.3900 | |
| 152 | D | A | -0.5106 | |
| 153 | Y | A | 0.0000 | |
| 154 | F | A | 0.0000 | |
| 155 | P | A | 0.0000 | |
| 156 | E | A | -0.7495 | |
| 157 | P | A | -0.8851 | |
| 158 | V | A | 0.0000 | |
| 159 | T | A | -0.9394 | |
| 160 | V | A | 0.0000 | |
| 161 | S | A | -0.5925 | |
| 162 | W | A | 0.0000 | |
| 163 | N | A | -0.1397 | |
| 164 | S | A | -0.4756 | |
| 165 | G | A | -0.7624 | |
| 166 | A | A | -0.2125 | |
| 167 | L | A | 0.1154 | |
| 168 | T | A | -0.1551 | |
| 169 | S | A | -0.3157 | |
| 170 | G | A | -0.3381 | |
| 171 | V | A | 0.2307 | |
| 172 | H | A | -0.2041 | |
| 173 | T | A | 0.2417 | |
| 174 | F | A | 0.9073 | |
| 175 | P | A | 0.5043 | |
| 176 | A | A | 1.1371 | |
| 177 | V | A | 2.3077 | |
| 178 | L | A | 1.7985 | |
| 179 | Q | A | 0.2718 | |
| 180 | S | A | -0.0901 | |
| 181 | S | A | -0.2990 | |
| 182 | G | A | 0.1923 | |
| 183 | L | A | 0.0736 | |
| 184 | Y | A | 0.7717 | |
| 185 | S | A | 0.5356 | |
| 186 | L | A | 0.0000 | |
| 187 | S | A | 0.6515 | |
| 188 | S | A | 0.0000 | |
| 189 | V | A | 0.9091 | |
| 190 | V | A | 0.0000 | |
| 191 | T | A | -0.0964 | |
| 192 | V | A | 0.0000 | |
| 193 | P | A | -0.4657 | |
| 194 | S | A | -0.3569 | |
| 199 | T | A | -0.3970 | |
| 200 | Q | A | -0.5621 | |
| 201 | T | A | 0.0674 | |
| 202 | Y | A | 0.8086 | |
| 203 | I | A | 1.1550 | |
| 204 | C | A | 0.5802 | |
| 205 | N | A | -1.0367 | |
| 206 | V | A | -0.6879 | |
| 207 | N | A | -2.1425 | |
| 208 | H | A | 0.0000 | |
| 209 | K | A | -2.6599 | |
| 210 | P | A | -1.9022 | |
| 211 | S | A | -1.9476 | |
| 212 | N | A | -2.3826 | |
| 213 | T | A | -1.4167 |