| Chain sequence(s) |
A: MTILSTFTSFSNPPKLNKSSFSSSTGSSLSMGSNSFAWGGGWGGFGGPKGGSFNVDIAGNLIWGVYGFIRGGVGLVKWRGLQKGCKQP
B: QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ input PDB |
| Selected Chain(s) | A,B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:34)
[INFO] Main: Simulation completed successfully. (00:02:35)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.9157 | |
| 2 | T | A | 0.3079 | |
| 3 | I | A | 0.0000 | |
| 4 | L | A | 0.2475 | |
| 5 | S | A | 0.3271 | |
| 6 | T | A | 0.0304 | |
| 7 | F | A | 0.0000 | |
| 8 | T | A | 0.7114 | |
| 9 | S | A | 0.4792 | |
| 10 | F | A | 0.5752 | |
| 11 | S | A | -0.4740 | |
| 12 | N | A | -1.4405 | |
| 13 | P | A | 0.0000 | |
| 14 | P | A | -1.5539 | |
| 15 | K | A | -2.8915 | |
| 16 | L | A | -2.2533 | |
| 17 | N | A | -2.6064 | |
| 18 | K | A | -3.0026 | |
| 19 | S | A | -1.6257 | |
| 20 | S | A | 0.0000 | |
| 21 | F | A | -0.8875 | |
| 22 | S | A | -0.6453 | |
| 23 | S | A | -0.6585 | |
| 24 | S | A | -0.4639 | |
| 25 | T | A | -0.3640 | |
| 26 | G | A | -1.0105 | |
| 27 | S | A | -1.0454 | |
| 28 | S | A | -0.5817 | |
| 29 | L | A | 0.0000 | |
| 30 | S | A | -0.3413 | |
| 31 | M | A | 0.0000 | |
| 32 | G | A | -0.7669 | |
| 33 | S | A | -0.7654 | |
| 34 | N | A | -1.3570 | |
| 35 | S | A | -1.1624 | |
| 36 | F | A | -0.7898 | |
| 37 | A | A | -0.6034 | |
| 38 | W | A | 0.1977 | |
| 39 | G | A | 0.0000 | |
| 40 | G | A | -0.7637 | |
| 41 | G | A | -0.8171 | |
| 42 | W | A | -0.8709 | |
| 43 | G | A | 0.0000 | |
| 44 | G | A | 0.0000 | |
| 45 | F | A | 0.0000 | |
| 46 | G | A | -1.3338 | |
| 47 | G | A | 0.0000 | |
| 48 | P | A | -1.3651 | |
| 49 | K | A | -2.2961 | |
| 50 | G | A | -1.4854 | |
| 51 | G | A | -0.7087 | |
| 52 | S | A | 0.0764 | |
| 53 | F | A | 0.0000 | |
| 54 | N | A | 0.0000 | |
| 55 | V | A | 0.5889 | |
| 56 | D | A | 0.0000 | |
| 57 | I | A | 1.0331 | |
| 58 | A | A | 0.5269 | |
| 59 | G | A | -0.3434 | |
| 60 | N | A | -0.5874 | |
| 61 | L | A | 1.1354 | |
| 62 | I | A | 0.7289 | |
| 63 | W | A | 0.3561 | |
| 64 | G | A | -0.1188 | |
| 65 | V | A | 0.0000 | |
| 66 | Y | A | 0.0000 | |
| 67 | G | A | 0.0000 | |
| 68 | F | A | 0.5975 | |
| 69 | I | A | 0.0300 | |
| 70 | R | A | -1.2640 | |
| 71 | G | A | -0.4890 | |
| 72 | G | A | 0.3007 | |
| 73 | V | A | 1.6499 | |
| 74 | G | A | 0.0000 | |
| 75 | L | A | 0.8989 | |
| 76 | V | A | 1.2676 | |
| 77 | K | A | -0.4771 | |
| 78 | W | A | 0.0532 | |
| 79 | R | A | -0.8746 | |
| 80 | G | A | -1.2498 | |
| 81 | L | A | -1.2849 | |
| 82 | Q | A | -1.7840 | |
| 83 | K | A | -1.6217 | |
| 84 | G | A | -1.4966 | |
| 85 | C | A | -1.5963 | |
| 86 | K | A | -1.9490 | |
| 87 | Q | A | -2.0332 | |
| 88 | P | A | -1.8042 | |
| 1 | Q | B | -3.0168 | |
| 2 | Q | B | -2.6763 | |
| 3 | Q | B | -2.8425 | |
| 4 | Q | B | -2.7240 | |
| 5 | Q | B | 0.0000 | |
| 6 | Q | B | -3.3056 | |
| 7 | Q | B | -2.9635 | |
| 8 | Q | B | 0.0000 | |
| 9 | Q | B | -2.8271 | |
| 10 | Q | B | -2.7806 | |
| 11 | Q | B | -2.5708 | |
| 12 | Q | B | -2.3362 | |
| 13 | Q | B | -2.6521 | |
| 14 | Q | B | -2.7545 | |
| 15 | Q | B | -2.6671 | |
| 16 | Q | B | 0.0000 | |
| 17 | Q | B | -2.5536 | |
| 18 | Q | B | -2.4093 | |
| 19 | Q | B | -2.4231 | |
| 20 | Q | B | 0.0000 | |
| 21 | Q | B | -2.5118 | |
| 22 | Q | B | -2.6355 | |
| 23 | Q | B | -2.7405 | |
| 24 | Q | B | -2.9321 | |
| 25 | Q | B | -2.8665 | |
| 26 | Q | B | -2.7797 | |
| 27 | Q | B | -2.9915 | |
| 28 | Q | B | -2.8928 | |
| 29 | Q | B | -3.0724 | |
| 30 | Q | B | -2.9277 | |
| 31 | Q | B | -2.6527 | |
| 32 | Q | B | -2.2790 | |
| 33 | Q | B | -2.1226 | |
| 34 | Q | B | -1.9694 | |
| 35 | Q | B | -2.4039 | |
| 36 | Q | B | -1.9957 | |
| 37 | Q | B | -2.9060 | |
| 38 | Q | B | -2.9881 | |
| 39 | Q | B | -3.3616 | |
| 40 | Q | B | -3.6845 | |
| 41 | Q | B | -3.2953 | |
| 42 | Q | B | -2.2123 | |
| 43 | Q | B | -2.4544 | |
| 44 | Q | B | -2.5140 | |
| 45 | Q | B | -2.4418 | |
| 46 | Q | B | -2.1623 |