| Chain sequence(s) |
D: VEDFFIVPVSGDPAIDLLQADGNALPSAVKLAYSPASKTNTLVGVLTLVHTNDATKKNVLVKLVTPQLTDVLNPTLQIPVSVQVTVYPVSTTAKEFEAAALGYSASGVNGLVSIVLTVISAAPKTAGTAPTAGNYSGVVSLVMTLG
input PDB |
| Selected Chain(s) | D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with D chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:22)
[INFO] Main: Simulation completed successfully. (00:01:23)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 42 | V | D | 0.6490 | |
| 43 | E | D | -1.1240 | |
| 44 | D | D | -0.5524 | |
| 45 | F | D | 2.4716 | |
| 46 | F | D | 3.6038 | |
| 47 | I | D | 4.0600 | |
| 48 | V | D | 3.7288 | |
| 49 | P | D | 2.1222 | |
| 50 | V | D | 1.8141 | |
| 51 | S | D | -0.0554 | |
| 52 | G | D | -1.2995 | |
| 53 | D | D | -2.6857 | |
| 54 | P | D | -1.8592 | |
| 55 | A | D | -1.6475 | |
| 56 | I | D | 0.0000 | |
| 57 | D | D | -2.2023 | |
| 58 | L | D | -0.6939 | |
| 59 | L | D | -0.4949 | |
| 60 | Q | D | -0.4002 | |
| 61 | A | D | -0.3275 | |
| 62 | D | D | -2.0784 | |
| 63 | G | D | -1.8334 | |
| 64 | N | D | -1.8351 | |
| 65 | A | D | -0.8154 | |
| 66 | L | D | 0.2464 | |
| 67 | P | D | -0.0460 | |
| 68 | S | D | 0.1583 | |
| 69 | A | D | 0.1238 | |
| 70 | V | D | 0.1943 | |
| 71 | K | D | -0.9566 | |
| 72 | L | D | 0.2149 | |
| 73 | A | D | 0.2434 | |
| 74 | Y | D | 0.2595 | |
| 75 | S | D | -0.2698 | |
| 76 | P | D | -0.5335 | |
| 77 | A | D | -0.3890 | |
| 78 | S | D | -0.7321 | |
| 79 | K | D | -1.1178 | |
| 80 | T | D | -0.4468 | |
| 81 | N | D | 0.2055 | |
| 82 | T | D | 0.6489 | |
| 83 | L | D | 1.5319 | |
| 84 | V | D | 0.9279 | |
| 85 | G | D | 0.8132 | |
| 86 | V | D | 1.1848 | |
| 87 | L | D | 1.7325 | |
| 88 | T | D | 0.0000 | |
| 89 | L | D | 0.0000 | |
| 90 | V | D | 0.0000 | |
| 91 | H | D | -1.3185 | |
| 92 | T | D | -1.7385 | |
| 93 | N | D | -2.2844 | |
| 94 | D | D | -1.6878 | |
| 95 | A | D | -1.0301 | |
| 96 | T | D | -1.1745 | |
| 97 | K | D | -2.0452 | |
| 98 | K | D | -2.4697 | |
| 99 | N | D | 0.0000 | |
| 100 | V | D | -0.9547 | |
| 101 | L | D | 0.0000 | |
| 102 | V | D | 0.8513 | |
| 103 | K | D | 0.0000 | |
| 104 | L | D | 2.8152 | |
| 105 | V | D | 2.8569 | |
| 106 | T | D | 1.2269 | |
| 107 | P | D | 0.0000 | |
| 108 | Q | D | -0.2198 | |
| 109 | L | D | 0.0170 | |
| 110 | T | D | 0.1075 | |
| 111 | D | D | 0.0000 | |
| 112 | V | D | 1.8611 | |
| 113 | L | D | 1.8685 | |
| 114 | N | D | 0.4835 | |
| 115 | P | D | 0.2721 | |
| 116 | T | D | 0.0409 | |
| 117 | L | D | 0.0289 | |
| 118 | Q | D | -1.1874 | |
| 119 | I | D | 0.0000 | |
| 120 | P | D | -0.9193 | |
| 121 | V | D | 0.0000 | |
| 122 | S | D | -0.1106 | |
| 123 | V | D | 0.0000 | |
| 124 | Q | D | 0.4364 | |
| 125 | V | D | 0.0000 | |
| 126 | T | D | 1.7070 | |
| 127 | V | D | 2.4212 | |
| 128 | Y | D | 1.9214 | |
| 129 | P | D | 0.4964 | |
| 130 | V | D | 0.0000 | |
| 131 | S | D | 0.4313 | |
| 132 | T | D | 0.8641 | |
| 133 | T | D | 0.0305 | |
| 134 | A | D | -0.2323 | |
| 135 | K | D | -0.9845 | |
| 136 | E | D | -2.5258 | |
| 137 | F | D | 0.0000 | |
| 138 | E | D | -2.7608 | |
| 139 | A | D | -1.5916 | |
| 140 | A | D | -0.6188 | |
| 141 | A | D | -0.5424 | |
| 142 | L | D | 0.0000 | |
| 143 | G | D | 0.2256 | |
| 144 | Y | D | 0.6728 | |
| 145 | S | D | -0.0623 | |
| 146 | A | D | 0.1495 | |
| 147 | S | D | -0.2656 | |
| 148 | G | D | -0.4497 | |
| 149 | V | D | 0.0896 | |
| 150 | N | D | -1.0763 | |
| 151 | G | D | -0.8183 | |
| 152 | L | D | 0.0338 | |
| 153 | V | D | 0.0000 | |
| 154 | S | D | 0.9359 | |
| 155 | I | D | 1.8308 | |
| 156 | V | D | 0.0000 | |
| 157 | L | D | 2.0568 | |
| 158 | T | D | 0.0000 | |
| 159 | V | D | 1.2004 | |
| 160 | I | D | 0.7023 | |
| 161 | S | D | 0.4728 | |
| 162 | A | D | 0.0000 | |
| 163 | A | D | -0.5131 | |
| 164 | P | D | -1.2585 | |
| 165 | K | D | -1.9639 | |
| 166 | T | D | -1.0117 | |
| 167 | A | D | -0.7581 | |
| 168 | G | D | -0.9232 | |
| 169 | T | D | -0.7361 | |
| 170 | A | D | -0.5700 | |
| 171 | P | D | -0.5813 | |
| 172 | T | D | -0.3146 | |
| 173 | A | D | -0.4417 | |
| 174 | G | D | -0.5249 | |
| 175 | N | D | -0.7271 | |
| 176 | Y | D | -0.0432 | |
| 177 | S | D | -0.0906 | |
| 178 | G | D | 0.5688 | |
| 179 | V | D | 1.9940 | |
| 180 | V | D | 1.9284 | |
| 181 | S | D | 1.9646 | |
| 182 | L | D | 1.9380 | |
| 183 | V | D | 1.6258 | |
| 184 | M | D | 0.5689 | |
| 185 | T | D | -0.1790 | |
| 186 | L | D | -0.8572 | |
| 187 | G | D | -1.3879 |