Project name: query_structure

Status: done

Started: 2025-11-29 10:30:01
Settings
Chain sequence(s) A: GSIPACGESCFKGKCYTPGCSCSKYPLCAKN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:24)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:24)
Show buried residues

Minimal score value
-1.8003
Maximal score value
1.021
Average score
-0.3612
Total score value
-11.1967

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -1.4267
2 S A -0.8523
3 I A -0.1396
4 P A -0.1835
5 A A -0.3724
6 C A -0.4501
7 G A -0.4597
8 E A -0.0933
9 S A 0.2643
10 C A 0.0000
11 F A 0.9281
12 K A -1.2769
13 G A -1.1558
14 K A -1.4560
15 C A -0.2282
16 Y A 0.6539
17 T A -0.0357
18 P A -0.4245
19 G A -0.9117
20 C A -0.8898
21 S A -0.7817
22 C A -0.0547
23 S A -0.5973
24 K A -0.5962
25 Y A 1.0210
26 P A 0.9340
27 L A 0.6207
28 C A 0.0000
29 A A 0.0000
30 K A -1.4323
31 N A -1.8003
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Laboratory of Theory of Biopolymers 2018