| Chain sequence(s) |
A: GSIPACGESCFKGKCYTPGCSCSKYPLCAKN
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:24)
[INFO] Main: Simulation completed successfully. (00:00:24)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -1.4267 | |
| 2 | S | A | -0.8523 | |
| 3 | I | A | -0.1396 | |
| 4 | P | A | -0.1835 | |
| 5 | A | A | -0.3724 | |
| 6 | C | A | -0.4501 | |
| 7 | G | A | -0.4597 | |
| 8 | E | A | -0.0933 | |
| 9 | S | A | 0.2643 | |
| 10 | C | A | 0.0000 | |
| 11 | F | A | 0.9281 | |
| 12 | K | A | -1.2769 | |
| 13 | G | A | -1.1558 | |
| 14 | K | A | -1.4560 | |
| 15 | C | A | -0.2282 | |
| 16 | Y | A | 0.6539 | |
| 17 | T | A | -0.0357 | |
| 18 | P | A | -0.4245 | |
| 19 | G | A | -0.9117 | |
| 20 | C | A | -0.8898 | |
| 21 | S | A | -0.7817 | |
| 22 | C | A | -0.0547 | |
| 23 | S | A | -0.5973 | |
| 24 | K | A | -0.5962 | |
| 25 | Y | A | 1.0210 | |
| 26 | P | A | 0.9340 | |
| 27 | L | A | 0.6207 | |
| 28 | C | A | 0.0000 | |
| 29 | A | A | 0.0000 | |
| 30 | K | A | -1.4323 | |
| 31 | N | A | -1.8003 |