| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVVNGKVLVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTAPVTCGADDRVAFSFDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYVRCGPVGHPLPSAPPPSPLYVPPPPGSPYAVLPPYDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLSTPEINVYDPSNFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9499 | |
| 2 | L | A | 1.9779 | |
| 3 | P | A | 0.7054 | |
| 4 | P | A | 0.1150 | |
| 5 | T | A | 0.2025 | |
| 6 | T | A | 0.1569 | |
| 7 | P | A | 0.2625 | |
| 8 | V | A | 1.2568 | |
| 9 | A | A | 0.0461 | |
| 10 | K | A | -1.1292 | |
| 11 | V | A | -0.3521 | |
| 12 | Q | A | -1.4844 | |
| 13 | S | A | -1.6101 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.5449 | |
| 16 | E | A | -2.5262 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4482 | |
| 20 | P | A | 0.0496 | |
| 21 | T | A | 0.1088 | |
| 22 | S | A | -0.1765 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.0600 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2393 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.7299 | |
| 31 | R | A | -2.6956 | |
| 32 | L | A | -0.8609 | |
| 33 | L | A | 1.0399 | |
| 34 | T | A | 1.3464 | |
| 35 | V | A | 1.9335 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2226 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6508 | |
| 40 | K | A | -1.8604 | |
| 41 | D | A | -0.7052 | |
| 42 | I | A | 1.3476 | |
| 43 | V | A | 2.3237 | |
| 44 | V | A | 1.6347 | |
| 45 | N | A | -0.5579 | |
| 46 | G | A | -0.3593 | |
| 47 | K | A | -0.1042 | |
| 48 | V | A | 2.2587 | |
| 49 | L | A | 2.5714 | |
| 50 | V | A | 1.5014 | |
| 51 | P | A | 0.3860 | |
| 52 | K | A | -0.6601 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1949 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4494 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.3350 | |
| 70 | K | A | -1.8694 | |
| 71 | F | A | -0.9277 | |
| 72 | A | A | -0.6006 | |
| 73 | L | A | -0.9336 | |
| 74 | P | A | -1.2527 | |
| 75 | Q | A | -2.4741 | |
| 76 | K | A | -3.0866 | |
| 77 | D | A | -2.9702 | |
| 78 | F | A | -1.6363 | |
| 79 | Y | A | -1.8930 | |
| 80 | D | A | -2.6831 | |
| 81 | P | A | -2.3168 | |
| 82 | E | A | -3.0238 | |
| 83 | K | A | -3.3746 | |
| 84 | E | A | -2.4317 | |
| 85 | R | A | -1.2667 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.5153 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -1.0199 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.4009 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.8303 | |
| 99 | G | A | -0.6424 | |
| 100 | P | A | -0.4422 | |
| 101 | L | A | -0.0426 | |
| 102 | G | A | -0.5350 | |
| 103 | K | A | -0.8945 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.3981 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1883 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4935 | |
| 110 | L | A | 0.4030 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.0429 | |
| 113 | K | A | -0.1991 | |
| 114 | L | A | -0.5785 | |
| 115 | G | A | -0.6428 | |
| 116 | D | A | -1.3476 | |
| 117 | T | A | -1.1380 | |
| 118 | E | A | -2.4914 | |
| 119 | N | A | -2.3466 | |
| 120 | P | A | -1.5212 | |
| 121 | T | A | -0.7611 | |
| 122 | A | A | -0.1918 | |
| 123 | P | A | 0.5191 | |
| 124 | V | A | 0.6741 | |
| 125 | T | A | 0.5818 | |
| 126 | C | A | -0.2862 | |
| 127 | G | A | -1.0281 | |
| 128 | A | A | -1.1902 | |
| 129 | D | A | -2.1459 | |
| 130 | D | A | -1.6430 | |
| 131 | R | A | -1.0375 | |
| 132 | V | A | 0.4144 | |
| 133 | A | A | 0.5558 | |
| 134 | F | A | 0.3570 | |
| 135 | S | A | -0.0600 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | 0.0000 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.2161 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5459 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2293 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.0568 | |
| 157 | D | A | 0.3197 | |
| 158 | I | A | 0.7779 | |
| 159 | A | A | 0.0451 | |
| 160 | E | A | -1.4952 | |
| 161 | P | A | -0.2564 | |
| 162 | C | A | 0.1789 | |
| 163 | P | A | -0.1938 | |
| 164 | G | A | -0.1187 | |
| 165 | L | A | 0.5214 | |
| 166 | P | A | -0.1679 | |
| 167 | P | A | -0.3642 | |
| 168 | G | A | -0.4347 | |
| 169 | A | A | -0.0411 | |
| 170 | C | A | 0.7339 | |
| 171 | P | A | 0.5702 | |
| 172 | P | A | 0.6290 | |
| 173 | I | A | 1.8144 | |
| 174 | Q | A | 0.7126 | |
| 175 | L | A | 1.3034 | |
| 176 | V | A | 0.7766 | |
| 177 | N | A | -0.3232 | |
| 178 | S | A | -0.0235 | |
| 179 | V | A | 0.3614 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3755 | |
| 182 | D | A | 0.2649 | |
| 183 | G | A | -0.1819 | |
| 184 | D | A | -0.5522 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | -0.4294 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1103 | |
| 190 | F | A | 0.0625 | |
| 191 | G | A | -0.0881 | |
| 192 | N | A | -0.2992 | |
| 193 | M | A | -0.1402 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.2807 | |
| 197 | E | A | -2.4649 | |
| 198 | L | A | -1.1313 | |
| 199 | Q | A | -2.4577 | |
| 200 | Q | A | -3.2594 | |
| 201 | D | A | -3.5414 | |
| 202 | R | A | -3.2820 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1507 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3973 | |
| 211 | S | A | -1.8531 | |
| 212 | T | A | -1.4284 | |
| 213 | R | A | -2.0004 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.2097 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3133 | |
| 220 | L | A | 0.5706 | |
| 221 | K | A | -1.1745 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9003 | |
| 224 | N | A | -1.6254 | |
| 225 | E | A | -1.2407 | |
| 226 | A | A | -0.7747 | |
| 227 | Y | A | -0.4025 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6458 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1059 | |
| 234 | F | A | 0.1341 | |
| 235 | G | A | -0.7652 | |
| 236 | R | A | -2.2917 | |
| 237 | R | A | -2.7048 | |
| 238 | E | A | -1.6510 | |
| 239 | Q | A | 0.0474 | |
| 240 | V | A | 1.4346 | |
| 241 | Y | A | 0.9140 | |
| 242 | A | A | -0.0545 | |
| 243 | R | A | -1.3996 | |
| 244 | H | A | -1.1228 | |
| 245 | F | A | -0.3147 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.3005 | |
| 249 | C | A | -0.5212 | |
| 250 | G | A | -0.5848 | |
| 251 | P | A | -0.5582 | |
| 252 | V | A | -0.5920 | |
| 253 | G | A | -0.9407 | |
| 254 | H | A | -1.0935 | |
| 255 | P | A | -0.4981 | |
| 256 | L | A | 0.4673 | |
| 257 | P | A | -0.0701 | |
| 258 | S | A | 0.0716 | |
| 259 | A | A | 0.4634 | |
| 260 | P | A | -0.1114 | |
| 261 | P | A | -0.2030 | |
| 262 | P | A | 0.0173 | |
| 263 | S | A | 0.4903 | |
| 264 | P | A | 0.6797 | |
| 265 | L | A | 1.8576 | |
| 266 | Y | A | 1.6837 | |
| 267 | V | A | 1.8817 | |
| 268 | P | A | 1.1393 | |
| 269 | P | A | 0.6754 | |
| 270 | P | A | -0.1890 | |
| 271 | P | A | -0.5021 | |
| 272 | G | A | -0.3269 | |
| 273 | S | A | 0.1969 | |
| 274 | P | A | 0.6770 | |
| 275 | Y | A | 1.8274 | |
| 276 | A | A | 1.3852 | |
| 277 | V | A | 2.4594 | |
| 278 | L | A | 1.9772 | |
| 279 | P | A | 0.9770 | |
| 280 | P | A | 0.4953 | |
| 281 | Y | A | 0.4496 | |
| 282 | D | A | -0.1571 | |
| 283 | Y | A | 1.0949 | |
| 284 | F | A | 0.8196 | |
| 285 | G | A | -0.0019 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.7717 | |
| 291 | L | A | 1.5736 | |
| 292 | V | A | 0.4806 | |
| 293 | S | A | -0.1985 | |
| 294 | S | A | -0.8369 | |
| 295 | D | A | -1.8757 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1363 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.7127 | |
| 301 | R | A | -2.0355 | |
| 302 | P | A | -1.0446 | |
| 303 | F | A | -0.1933 | |
| 304 | W | A | -0.3623 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.1711 | |
| 307 | R | A | -2.9053 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.7980 | |
| 310 | G | A | -1.3851 | |
| 311 | N | A | -1.3767 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8005 | |
| 319 | N | A | -0.8695 | |
| 320 | E | A | -1.0344 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.4706 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.2810 | |
| 333 | N | A | 0.3671 | |
| 334 | F | A | 1.4605 | |
| 335 | T | A | 0.6851 | |
| 336 | I | A | 0.4121 | |
| 337 | S | A | -0.9183 | |
| 338 | Q | A | -1.6228 | |
| 339 | Q | A | -0.9556 | |
| 340 | L | A | 0.3589 | |
| 341 | S | A | -0.0658 | |
| 342 | T | A | -0.3819 | |
| 343 | P | A | -1.0604 | |
| 344 | E | A | -1.6410 | |
| 345 | I | A | -0.0819 | |
| 346 | N | A | -0.2855 | |
| 347 | V | A | 1.6352 | |
| 348 | Y | A | 1.6075 | |
| 349 | D | A | -0.0113 | |
| 350 | P | A | -0.7181 | |
| 351 | S | A | -0.6396 | |
| 352 | N | A | -0.6573 | |
| 353 | F | A | -1.0405 | |
| 354 | K | A | -1.9821 | |
| 355 | N | A | -1.6947 | |
| 356 | Y | A | 0.0444 | |
| 357 | L | A | 0.7866 | |
| 358 | R | A | 0.9950 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.1514 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.4017 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9728 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6576 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2584 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3187 | |
| 376 | L | A | -1.7167 | |
| 377 | D | A | -2.0180 | |
| 378 | P | A | -1.0827 | |
| 379 | G | A | -1.0891 | |
| 380 | V | A | 0.0000 | |
| 381 | L | A | -0.6016 | |
| 382 | A | A | -0.6995 | |
| 383 | H | A | -0.8845 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4029 | |
| 386 | T | A | -0.5768 | |
| 387 | M | A | -0.3293 | |
| 388 | N | A | -0.8743 | |
| 389 | P | A | -1.2441 | |
| 390 | T | A | -1.4908 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4678 | |
| 393 | E | A | -2.8339 | |
| 394 | N | A | -2.3624 | |
| 395 | W | A | -1.5002 | |
| 396 | N | A | -1.2940 | |
| 397 | L | A | -0.2157 | |
| 398 | G | A | 0.5886 | |
| 399 | F | A | 2.3767 | |
| 400 | V | A | 1.7595 | |
| 401 | P | A | 0.0391 | |
| 402 | P | A | -1.9045 | |
| 403 | K | A | -3.3652 | |
| 404 | E | A | -3.8087 | |
| 405 | R | A | -4.0327 | |
| 406 | E | A | -3.7897 | |
| 407 | D | A | -2.8200 | |
| 408 | P | A | -1.7366 | |
| 409 | Y | A | -0.9805 | |
| 410 | K | A | -2.0980 | |
| 411 | G | A | -0.6226 | |
| 412 | L | A | 0.6744 | |
| 413 | I | A | 1.6508 | |
| 414 | F | A | 0.7146 | |
| 415 | W | A | -0.2682 | |
| 416 | E | A | -1.5884 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9540 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.1033 | |
| 421 | E | A | -2.7386 | |
| 422 | R | A | -2.3432 | |
| 423 | F | A | -1.2765 | |
| 424 | S | A | -1.5054 | |
| 425 | Q | A | -1.8022 | |
| 426 | D | A | -3.0091 | |
| 427 | L | A | 0.0000 | |
| 428 | D | A | -2.9012 | |
| 429 | Q | A | -2.6701 | |
| 430 | F | A | -1.5415 | |
| 431 | A | A | -0.9041 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.6693 | |
| 435 | K | A | -0.8344 | |
| 436 | F | A | 0.1223 | |
| 437 | L | A | 0.9517 | |
| 438 | Y | A | 0.7988 | |
| 439 | Q | A | -0.3170 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine