| Chain sequence(s) |
H: VQLVESGGGLVEPGGSLRLSCAASGFTFSNSDMNWVRQAPGKGLEWVSGVSWNGSRTHYADSVKGRFIISRDNSRNFLYQQMNSLRPEDMAVYYCVKVVTTEWGQGTLVTVSS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:04)
[INFO] Main: Simulation completed successfully. (00:01:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 0 | V | H | 1.4884 | |
| 1 | Q | H | -0.0402 | |
| 2 | L | H | 0.0000 | |
| 3 | V | H | 0.5592 | |
| 4 | E | H | 0.0857 | |
| 5 | S | H | -0.3971 | |
| 6 | G | H | -0.7487 | |
| 7 | G | H | -0.1729 | |
| 8 | G | H | 0.4440 | |
| 9 | L | H | 1.1181 | |
| 10 | V | H | 0.0000 | |
| 11 | E | H | -1.9923 | |
| 12 | P | H | -1.8848 | |
| 13 | G | H | -1.5949 | |
| 14 | G | H | -1.3703 | |
| 15 | S | H | -1.4041 | |
| 16 | L | H | -1.2488 | |
| 17 | R | H | -2.0863 | |
| 18 | L | H | 0.0000 | |
| 19 | S | H | -0.4714 | |
| 20 | C | H | 0.0000 | |
| 21 | A | H | -0.1450 | |
| 22 | A | H | 0.0753 | |
| 23 | S | H | 0.2487 | |
| 24 | G | H | 0.8171 | |
| 25 | F | H | 1.7532 | |
| 26 | T | H | 0.4248 | |
| 27 | F | H | 0.0000 | |
| 28 | S | H | -1.1307 | |
| 29 | N | H | -1.1237 | |
| 30 | S | H | 0.0000 | |
| 31 | D | H | -0.4340 | |
| 32 | M | H | 0.0000 | |
| 33 | N | H | 0.0712 | |
| 34 | W | H | 0.0000 | |
| 35 | V | H | 0.0000 | |
| 36 | R | H | 0.0000 | |
| 37 | Q | H | -0.3830 | |
| 38 | A | H | -0.9805 | |
| 39 | P | H | -0.8177 | |
| 40 | G | H | -1.4311 | |
| 41 | K | H | -2.0990 | |
| 42 | G | H | -0.9889 | |
| 43 | L | H | 0.5117 | |
| 44 | E | H | -0.1875 | |
| 45 | W | H | 0.5177 | |
| 46 | V | H | 0.0000 | |
| 47 | S | H | 0.0000 | |
| 48 | G | H | 0.0000 | |
| 49 | V | H | 0.0000 | |
| 50 | S | H | -1.1941 | |
| 51 | W | H | -0.7605 | |
| 52 | N | H | -1.5423 | |
| 53 | G | H | -1.4463 | |
| 54 | S | H | -1.3624 | |
| 55 | R | H | -2.2881 | |
| 56 | T | H | -1.3909 | |
| 57 | H | H | -1.6299 | |
| 58 | Y | H | -1.1379 | |
| 59 | A | H | -1.5316 | |
| 60 | D | H | -2.5708 | |
| 61 | S | H | -1.7801 | |
| 62 | V | H | 0.0000 | |
| 63 | K | H | -2.5569 | |
| 64 | G | H | -1.5676 | |
| 65 | R | H | -1.2923 | |
| 66 | F | H | 0.0000 | |
| 67 | I | H | 0.3601 | |
| 68 | I | H | 0.0000 | |
| 69 | S | H | -0.5366 | |
| 70 | R | H | -1.2224 | |
| 71 | D | H | -1.9921 | |
| 72 | N | H | -1.9828 | |
| 73 | S | H | -1.7703 | |
| 74 | R | H | -2.5262 | |
| 75 | N | H | -1.4440 | |
| 76 | F | H | -0.8887 | |
| 77 | L | H | 0.0000 | |
| 78 | Y | H | -0.4373 | |
| 79 | Q | H | 0.0000 | |
| 80 | Q | H | -0.9996 | |
| 81 | M | H | 0.0000 | |
| 82 | N | H | -1.6270 | |
| 83 | S | H | -1.4071 | |
| 84 | L | H | 0.0000 | |
| 85 | R | H | -2.2194 | |
| 86 | P | H | -1.8791 | |
| 87 | E | H | -2.1744 | |
| 88 | D | H | 0.0000 | |
| 89 | M | H | -0.2520 | |
| 90 | A | H | 0.0000 | |
| 91 | V | H | 0.7223 | |
| 92 | Y | H | 0.0000 | |
| 93 | Y | H | 0.4071 | |
| 94 | C | H | 0.0000 | |
| 95 | V | H | 0.0000 | |
| 96 | K | H | 0.0000 | |
| 97 | V | H | 0.5588 | |
| 98 | V | H | 1.5931 | |
| 99 | T | H | 0.5708 | |
| 100 | T | H | 0.5767 | |
| 101 | E | H | 0.2738 | |
| 102 | W | H | 0.2757 | |
| 103 | G | H | -0.2006 | |
| 104 | Q | H | -1.0208 | |
| 105 | G | H | -0.1544 | |
| 106 | T | H | 0.2250 | |
| 107 | L | H | 1.1430 | |
| 108 | V | H | 0.0000 | |
| 109 | T | H | 0.1447 | |
| 110 | V | H | 0.0000 | |
| 111 | S | H | -1.0757 | |
| 112 | S | H | -0.8764 |