Project name: d11badf653310c

Status: done

Started: 2025-11-11 16:10:37
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Chain sequence(s) H: VQLVESGGGLVEPGGSLRLSCAASGFTFSNSDMNWVRQAPGKGLEWVSGVSWNGSRTHYADSVKGRFIISRDNSRNFLYQQMNSLRPEDMAVYYCVKVVTTEWGQGTLVTVSS
input PDB
Selected Chain(s) H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with H chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:04)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:04)
Show buried residues

Minimal score value
-2.5708
Maximal score value
1.7532
Average score
-0.5213
Total score value
-58.9053

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
0 V H 1.4884
1 Q H -0.0402
2 L H 0.0000
3 V H 0.5592
4 E H 0.0857
5 S H -0.3971
6 G H -0.7487
7 G H -0.1729
8 G H 0.4440
9 L H 1.1181
10 V H 0.0000
11 E H -1.9923
12 P H -1.8848
13 G H -1.5949
14 G H -1.3703
15 S H -1.4041
16 L H -1.2488
17 R H -2.0863
18 L H 0.0000
19 S H -0.4714
20 C H 0.0000
21 A H -0.1450
22 A H 0.0753
23 S H 0.2487
24 G H 0.8171
25 F H 1.7532
26 T H 0.4248
27 F H 0.0000
28 S H -1.1307
29 N H -1.1237
30 S H 0.0000
31 D H -0.4340
32 M H 0.0000
33 N H 0.0712
34 W H 0.0000
35 V H 0.0000
36 R H 0.0000
37 Q H -0.3830
38 A H -0.9805
39 P H -0.8177
40 G H -1.4311
41 K H -2.0990
42 G H -0.9889
43 L H 0.5117
44 E H -0.1875
45 W H 0.5177
46 V H 0.0000
47 S H 0.0000
48 G H 0.0000
49 V H 0.0000
50 S H -1.1941
51 W H -0.7605
52 N H -1.5423
53 G H -1.4463
54 S H -1.3624
55 R H -2.2881
56 T H -1.3909
57 H H -1.6299
58 Y H -1.1379
59 A H -1.5316
60 D H -2.5708
61 S H -1.7801
62 V H 0.0000
63 K H -2.5569
64 G H -1.5676
65 R H -1.2923
66 F H 0.0000
67 I H 0.3601
68 I H 0.0000
69 S H -0.5366
70 R H -1.2224
71 D H -1.9921
72 N H -1.9828
73 S H -1.7703
74 R H -2.5262
75 N H -1.4440
76 F H -0.8887
77 L H 0.0000
78 Y H -0.4373
79 Q H 0.0000
80 Q H -0.9996
81 M H 0.0000
82 N H -1.6270
83 S H -1.4071
84 L H 0.0000
85 R H -2.2194
86 P H -1.8791
87 E H -2.1744
88 D H 0.0000
89 M H -0.2520
90 A H 0.0000
91 V H 0.7223
92 Y H 0.0000
93 Y H 0.4071
94 C H 0.0000
95 V H 0.0000
96 K H 0.0000
97 V H 0.5588
98 V H 1.5931
99 T H 0.5708
100 T H 0.5767
101 E H 0.2738
102 W H 0.2757
103 G H -0.2006
104 Q H -1.0208
105 G H -0.1544
106 T H 0.2250
107 L H 1.1430
108 V H 0.0000
109 T H 0.1447
110 V H 0.0000
111 S H -1.0757
112 S H -0.8764
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Laboratory of Theory of Biopolymers 2018