Project name: query_structure

Status: done

Started: 2025-11-29 11:01:00
Settings
Chain sequence(s) A: GVPTDVKCRGSPQCIQPCKDAGMRFGKCMNGKCHCTPK
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:00)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:01)
Show buried residues

Minimal score value
-3.1943
Maximal score value
0.3526
Average score
-1.471
Total score value
-55.8978

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.5894
2 V A 0.3526
3 P A -0.6450
4 T A -1.1658
5 D A -2.2372
6 V A -1.4553
7 K A -2.9138
8 C A 0.0000
9 R A -2.8351
10 G A -2.0026
11 S A -1.3398
12 P A -1.2238
13 Q A -2.2497
14 C A 0.0000
15 I A -1.2577
16 Q A -2.1568
17 P A -1.5775
18 C A 0.0000
19 K A -3.1943
20 D A -3.0821
21 A A -1.6582
22 G A -2.0234
23 M A -2.0139
24 R A -2.4540
25 F A -0.6503
26 G A 0.0000
27 K A -1.2776
28 C A -1.7979
29 M A -1.3440
30 N A -2.0196
31 G A -2.3588
32 K A -2.8706
33 C A 0.0000
34 H A -0.9164
35 C A 0.0000
36 T A -1.0507
37 P A -1.4143
38 K A -2.4748
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Laboratory of Theory of Biopolymers 2018