| Chain sequence(s) |
A: MAAGSITTLPALPEDGGSGAFPPGHFKDPKRLYCKNGGFFLRIHPDGRVDGVREKSDPHIKLQLQAEERGVVSIKGVCANRYLAMKEDGRLLASKCVTDECFFFERLESNNYNTYRSRKYTSWYVALKRTGQYKLGSKTGPGQKAILFLPMSAKS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:30)
[INFO] Main: Simulation completed successfully. (00:03:31)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.0406 | |
| 2 | A | A | 0.4472 | |
| 3 | A | A | 0.3318 | |
| 4 | G | A | 0.1417 | |
| 5 | S | A | 0.5320 | |
| 6 | I | A | 1.9352 | |
| 7 | T | A | 1.1467 | |
| 8 | T | A | 1.1343 | |
| 9 | L | A | 1.8680 | |
| 10 | P | A | 0.8715 | |
| 11 | A | A | 0.7359 | |
| 12 | L | A | 0.8356 | |
| 13 | P | A | -1.0481 | |
| 14 | E | A | -2.6168 | |
| 15 | D | A | -2.9369 | |
| 16 | G | A | -2.3509 | |
| 17 | G | A | -1.8058 | |
| 18 | S | A | -0.7803 | |
| 19 | G | A | -0.2387 | |
| 20 | A | A | 0.5248 | |
| 21 | F | A | 1.5050 | |
| 22 | P | A | 0.3653 | |
| 23 | P | A | 0.1349 | |
| 24 | G | A | -0.5312 | |
| 25 | H | A | -1.0369 | |
| 26 | F | A | -0.0176 | |
| 27 | K | A | -2.0829 | |
| 28 | D | A | -2.7540 | |
| 29 | P | A | -1.7037 | |
| 30 | K | A | -1.1095 | |
| 31 | R | A | -0.8367 | |
| 32 | L | A | 0.0000 | |
| 33 | Y | A | -0.1865 | |
| 34 | C | A | 0.0000 | |
| 35 | K | A | -1.0387 | |
| 36 | N | A | 0.0000 | |
| 37 | G | A | -1.5413 | |
| 38 | G | A | -1.1802 | |
| 39 | F | A | 0.0000 | |
| 40 | F | A | 0.0000 | |
| 41 | L | A | 0.0000 | |
| 42 | R | A | -1.0516 | |
| 43 | I | A | 0.0000 | |
| 44 | H | A | -1.6104 | |
| 45 | P | A | -1.8788 | |
| 46 | D | A | -2.6592 | |
| 47 | G | A | 0.0000 | |
| 48 | R | A | -2.4299 | |
| 49 | V | A | 0.0000 | |
| 50 | D | A | -1.0722 | |
| 51 | G | A | -1.2817 | |
| 52 | V | A | -1.8330 | |
| 53 | R | A | -3.1626 | |
| 54 | E | A | -3.6362 | |
| 55 | K | A | -3.3016 | |
| 56 | S | A | -2.0722 | |
| 57 | D | A | -1.8962 | |
| 58 | P | A | -0.8362 | |
| 59 | H | A | -0.6588 | |
| 60 | I | A | 0.0000 | |
| 61 | K | A | -1.0677 | |
| 62 | L | A | 0.0000 | |
| 63 | Q | A | -1.0003 | |
| 64 | L | A | -0.8464 | |
| 65 | Q | A | -1.4001 | |
| 66 | A | A | -1.8765 | |
| 67 | E | A | -2.9227 | |
| 68 | E | A | -3.1200 | |
| 69 | R | A | -2.9610 | |
| 70 | G | A | -1.8695 | |
| 71 | V | A | 0.0000 | |
| 72 | V | A | 0.0000 | |
| 73 | S | A | 0.0000 | |
| 74 | I | A | 0.0000 | |
| 75 | K | A | -0.6327 | |
| 76 | G | A | 0.0000 | |
| 77 | V | A | 0.2567 | |
| 78 | C | A | 0.2841 | |
| 79 | A | A | -1.2597 | |
| 80 | N | A | -1.4508 | |
| 81 | R | A | -1.5407 | |
| 82 | Y | A | -0.2869 | |
| 83 | L | A | 0.0000 | |
| 84 | A | A | 0.0000 | |
| 85 | M | A | 0.0000 | |
| 86 | K | A | -2.5115 | |
| 87 | E | A | -3.3240 | |
| 88 | D | A | -2.9696 | |
| 89 | G | A | 0.0000 | |
| 90 | R | A | -2.3804 | |
| 91 | L | A | 0.0000 | |
| 92 | L | A | -0.9047 | |
| 93 | A | A | 0.0000 | |
| 94 | S | A | -1.0358 | |
| 95 | K | A | -1.7552 | |
| 96 | C | A | 0.2952 | |
| 97 | V | A | 0.8554 | |
| 98 | T | A | -0.0627 | |
| 99 | D | A | -1.4970 | |
| 100 | E | A | -1.4458 | |
| 101 | C | A | 0.0000 | |
| 102 | F | A | 0.0000 | |
| 103 | F | A | 0.0000 | |
| 104 | F | A | -1.1613 | |
| 105 | E | A | -1.0024 | |
| 106 | R | A | -0.8912 | |
| 107 | L | A | 0.0696 | |
| 108 | E | A | -1.1649 | |
| 109 | S | A | -1.2867 | |
| 110 | N | A | -1.8531 | |
| 111 | N | A | -1.6949 | |
| 112 | Y | A | -0.8496 | |
| 113 | N | A | -0.4151 | |
| 114 | T | A | 0.0000 | |
| 115 | Y | A | 0.0000 | |
| 116 | R | A | -0.8793 | |
| 117 | S | A | 0.0000 | |
| 118 | R | A | -1.5989 | |
| 119 | K | A | -2.4537 | |
| 120 | Y | A | -1.4918 | |
| 121 | T | A | -0.7176 | |
| 122 | S | A | -0.6962 | |
| 123 | W | A | -0.5832 | |
| 124 | Y | A | -0.3413 | |
| 125 | V | A | 0.0000 | |
| 126 | A | A | 0.0000 | |
| 127 | L | A | 0.0000 | |
| 128 | K | A | -1.9982 | |
| 129 | R | A | -2.5845 | |
| 130 | T | A | -1.4452 | |
| 131 | G | A | 0.0000 | |
| 132 | Q | A | -1.3817 | |
| 133 | Y | A | -1.2320 | |
| 134 | K | A | -1.3772 | |
| 135 | L | A | -1.3957 | |
| 136 | G | A | 0.0000 | |
| 137 | S | A | -1.6855 | |
| 138 | K | A | -1.8107 | |
| 139 | T | A | -1.2038 | |
| 140 | G | A | -0.9284 | |
| 141 | P | A | -0.7652 | |
| 142 | G | A | -1.0033 | |
| 143 | Q | A | -1.3578 | |
| 144 | K | A | -1.7460 | |
| 145 | A | A | 0.0000 | |
| 146 | I | A | 0.0000 | |
| 147 | L | A | -0.5846 | |
| 148 | F | A | 0.0000 | |
| 149 | L | A | 0.3831 | |
| 150 | P | A | 0.1669 | |
| 151 | M | A | -0.1406 | |
| 152 | S | A | -1.0533 | |
| 153 | A | A | -1.7909 | |
| 154 | K | A | -2.1516 | |
| 155 | S | A | -1.1317 |