| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFADIVVNGKVLVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGSVGHPLFNKLGDTENPTAYQVCTADDRVAFSFDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRCGPDGHPLPAAPPPSPLYVPPPPTSPYAVLPPYDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLSTPAPNVYDPSNFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9500 | |
| 2 | L | A | 1.9720 | |
| 3 | P | A | 0.6541 | |
| 4 | P | A | 0.3590 | |
| 5 | T | A | 0.1162 | |
| 6 | T | A | 0.1294 | |
| 7 | P | A | 0.1822 | |
| 8 | V | A | 1.2173 | |
| 9 | A | A | 0.0279 | |
| 10 | K | A | -1.1728 | |
| 11 | V | A | -0.4384 | |
| 12 | Q | A | -1.5336 | |
| 13 | S | A | -1.5942 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.3676 | |
| 16 | E | A | -2.4139 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4697 | |
| 20 | P | A | 0.1381 | |
| 21 | T | A | 0.1656 | |
| 22 | S | A | -0.0931 | |
| 23 | L | A | 0.1072 | |
| 24 | F | A | -0.0102 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1670 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.7553 | |
| 31 | R | A | -2.6192 | |
| 32 | L | A | -0.7556 | |
| 33 | L | A | 1.2288 | |
| 34 | T | A | 1.4717 | |
| 35 | V | A | 2.0103 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | 0.2183 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | 0.1875 | |
| 40 | A | A | -0.1832 | |
| 41 | D | A | 0.0201 | |
| 42 | I | A | 1.8368 | |
| 43 | V | A | 2.4935 | |
| 44 | V | A | 1.6990 | |
| 45 | N | A | -0.5194 | |
| 46 | G | A | -0.3402 | |
| 47 | K | A | -0.1166 | |
| 48 | V | A | 2.2144 | |
| 49 | L | A | 2.5606 | |
| 50 | V | A | 1.7414 | |
| 51 | P | A | 0.6962 | |
| 52 | K | A | -0.0734 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.0880 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4208 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2769 | |
| 70 | K | A | -1.8202 | |
| 71 | F | A | -0.6756 | |
| 72 | A | A | -0.5786 | |
| 73 | L | A | -0.8467 | |
| 74 | P | A | -1.2483 | |
| 75 | Q | A | -2.4770 | |
| 76 | K | A | -3.0956 | |
| 77 | D | A | -2.9897 | |
| 78 | F | A | -1.6506 | |
| 79 | Y | A | -1.9205 | |
| 80 | D | A | -2.7629 | |
| 81 | P | A | -2.3557 | |
| 82 | E | A | -3.0740 | |
| 83 | K | A | -3.4401 | |
| 84 | E | A | -2.5018 | |
| 85 | R | A | -1.3152 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6300 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9558 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3189 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.7440 | |
| 99 | G | A | -0.5420 | |
| 100 | P | A | -0.4280 | |
| 101 | L | A | 0.0041 | |
| 102 | G | A | -0.2470 | |
| 103 | K | A | -0.7028 | |
| 104 | G | A | -0.5678 | |
| 105 | S | A | -0.5602 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1089 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.3917 | |
| 110 | L | A | 0.2750 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1070 | |
| 113 | K | A | -0.4651 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.6221 | |
| 117 | T | A | -1.3486 | |
| 118 | E | A | -2.5751 | |
| 119 | N | A | -2.4330 | |
| 120 | P | A | -1.6114 | |
| 121 | T | A | -0.8029 | |
| 122 | A | A | -0.1464 | |
| 123 | Y | A | 0.7755 | |
| 124 | Q | A | 0.3661 | |
| 125 | V | A | 1.4237 | |
| 126 | C | A | 0.1599 | |
| 127 | T | A | -0.5191 | |
| 128 | A | A | -0.9723 | |
| 129 | D | A | -2.0365 | |
| 130 | D | A | -1.3440 | |
| 131 | R | A | -1.0784 | |
| 132 | V | A | 0.2123 | |
| 133 | A | A | 0.4272 | |
| 134 | F | A | 0.2657 | |
| 135 | S | A | -0.1068 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.7733 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5455 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2247 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1182 | |
| 157 | D | A | 0.2920 | |
| 158 | I | A | 0.8322 | |
| 159 | A | A | 0.1074 | |
| 160 | E | A | -1.4858 | |
| 161 | P | A | -0.2691 | |
| 162 | C | A | 0.1608 | |
| 163 | P | A | -0.1903 | |
| 164 | G | A | -0.1001 | |
| 165 | L | A | 0.5459 | |
| 166 | P | A | -0.1345 | |
| 167 | P | A | -0.3515 | |
| 168 | G | A | -0.4285 | |
| 169 | A | A | -0.0363 | |
| 170 | C | A | 0.7391 | |
| 171 | P | A | 0.5398 | |
| 172 | P | A | 0.6853 | |
| 173 | I | A | 2.0395 | |
| 174 | Q | A | 0.8529 | |
| 175 | L | A | 1.4476 | |
| 176 | V | A | 0.8170 | |
| 177 | N | A | -0.3335 | |
| 178 | S | A | 0.0268 | |
| 179 | V | A | 0.4408 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3743 | |
| 182 | D | A | 0.0821 | |
| 183 | G | A | -0.1682 | |
| 184 | D | A | -0.5533 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1657 | |
| 190 | F | A | 0.0614 | |
| 191 | G | A | -0.1101 | |
| 192 | N | A | -0.2672 | |
| 193 | M | A | -0.1355 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3854 | |
| 197 | E | A | -2.6136 | |
| 198 | L | A | -1.2122 | |
| 199 | Q | A | -2.5270 | |
| 200 | Q | A | -3.3361 | |
| 201 | D | A | -3.5995 | |
| 202 | R | A | -3.3422 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.4461 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3894 | |
| 211 | S | A | -1.7179 | |
| 212 | T | A | -1.4527 | |
| 213 | R | A | -2.0965 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1696 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3123 | |
| 220 | L | A | 0.5341 | |
| 221 | K | A | -1.2438 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9468 | |
| 224 | N | A | -1.6747 | |
| 225 | E | A | -1.3094 | |
| 226 | A | A | -0.6782 | |
| 227 | Y | A | -0.4496 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7000 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1399 | |
| 234 | F | A | 0.0297 | |
| 235 | G | A | -0.8713 | |
| 236 | R | A | -2.5847 | |
| 237 | R | A | -2.7393 | |
| 238 | E | A | -2.0558 | |
| 239 | Q | A | -0.0486 | |
| 240 | V | A | 1.6108 | |
| 241 | Y | A | 1.2848 | |
| 242 | A | A | 0.1546 | |
| 243 | R | A | -1.2140 | |
| 244 | H | A | -1.2458 | |
| 245 | F | A | -0.2839 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.4387 | |
| 249 | C | A | -0.5842 | |
| 250 | G | A | -0.5927 | |
| 251 | P | A | -0.8566 | |
| 252 | D | A | -1.2423 | |
| 253 | G | A | -1.2561 | |
| 254 | H | A | -1.3806 | |
| 255 | P | A | -0.7028 | |
| 256 | L | A | 0.3741 | |
| 257 | P | A | 0.0326 | |
| 258 | A | A | 0.1583 | |
| 259 | A | A | 0.3574 | |
| 260 | P | A | -0.2481 | |
| 261 | P | A | 0.0033 | |
| 262 | P | A | 0.0684 | |
| 263 | S | A | 0.5705 | |
| 264 | P | A | 0.6922 | |
| 265 | L | A | 1.9234 | |
| 266 | Y | A | 1.8035 | |
| 267 | V | A | 1.9638 | |
| 268 | P | A | 1.0293 | |
| 269 | P | A | 0.7408 | |
| 270 | P | A | -0.1008 | |
| 271 | P | A | -0.0815 | |
| 272 | T | A | 0.0051 | |
| 273 | S | A | 0.2928 | |
| 274 | P | A | 0.8136 | |
| 275 | Y | A | 1.8123 | |
| 276 | A | A | 1.3726 | |
| 277 | V | A | 2.5869 | |
| 278 | L | A | 2.1418 | |
| 279 | P | A | 1.1101 | |
| 280 | P | A | 0.0000 | |
| 281 | Y | A | 0.1705 | |
| 282 | D | A | -0.4587 | |
| 283 | Y | A | 1.0571 | |
| 284 | F | A | 0.7997 | |
| 285 | G | A | 0.1148 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9662 | |
| 291 | L | A | 1.6629 | |
| 292 | V | A | 0.6680 | |
| 293 | S | A | -0.1449 | |
| 294 | S | A | -0.9650 | |
| 295 | D | A | -1.8359 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.0854 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6286 | |
| 301 | R | A | -1.8606 | |
| 302 | P | A | -0.9498 | |
| 303 | F | A | -0.1697 | |
| 304 | W | A | -0.5053 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0783 | |
| 307 | R | A | -2.9165 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.7815 | |
| 310 | G | A | -1.4205 | |
| 311 | N | A | -1.3928 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.7113 | |
| 319 | N | A | -0.8160 | |
| 320 | E | A | -0.9911 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3571 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1873 | |
| 333 | N | A | 0.3696 | |
| 334 | F | A | 1.4219 | |
| 335 | T | A | 0.7133 | |
| 336 | I | A | 0.3357 | |
| 337 | S | A | -1.1090 | |
| 338 | Q | A | -1.8866 | |
| 339 | Q | A | -1.5675 | |
| 340 | L | A | 0.2592 | |
| 341 | S | A | 0.0303 | |
| 342 | T | A | -0.1666 | |
| 343 | P | A | -0.4725 | |
| 344 | A | A | -0.1216 | |
| 345 | P | A | -0.0403 | |
| 346 | N | A | -0.2908 | |
| 347 | V | A | 1.5033 | |
| 348 | Y | A | 1.3606 | |
| 349 | D | A | -0.1536 | |
| 350 | P | A | -0.7638 | |
| 351 | S | A | -0.6025 | |
| 352 | N | A | -0.4560 | |
| 353 | F | A | -1.1367 | |
| 354 | K | A | -2.0786 | |
| 355 | N | A | -1.8549 | |
| 356 | Y | A | -0.1845 | |
| 357 | L | A | 0.5369 | |
| 358 | R | A | 0.8807 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4736 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0098 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9294 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6781 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2732 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3159 | |
| 376 | L | A | -1.7434 | |
| 377 | D | A | -2.0116 | |
| 378 | P | A | -1.0532 | |
| 379 | G | A | -1.0148 | |
| 380 | V | A | -0.9286 | |
| 381 | L | A | -0.5403 | |
| 382 | A | A | -0.6627 | |
| 383 | H | A | -0.8541 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4076 | |
| 386 | T | A | -0.5841 | |
| 387 | M | A | -0.3404 | |
| 388 | N | A | -0.8839 | |
| 389 | P | A | -1.2352 | |
| 390 | T | A | -1.4044 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.3947 | |
| 393 | E | A | -2.7292 | |
| 394 | N | A | -2.4709 | |
| 395 | W | A | -1.3132 | |
| 396 | N | A | -1.2372 | |
| 397 | L | A | -0.1789 | |
| 398 | G | A | 0.5712 | |
| 399 | F | A | 2.4194 | |
| 400 | V | A | 1.8446 | |
| 401 | P | A | 0.0717 | |
| 402 | P | A | -1.7199 | |
| 403 | K | A | -3.4090 | |
| 404 | E | A | -3.7680 | |
| 405 | R | A | -3.7306 | |
| 406 | E | A | -3.6622 | |
| 407 | D | A | -2.8086 | |
| 408 | P | A | -1.7047 | |
| 409 | Y | A | -0.9683 | |
| 410 | K | A | -2.0606 | |
| 411 | G | A | -0.6141 | |
| 412 | L | A | 0.7627 | |
| 413 | I | A | 1.5931 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3760 | |
| 416 | E | A | -1.6186 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8293 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.8879 | |
| 421 | E | A | -2.4946 | |
| 422 | R | A | -2.0598 | |
| 423 | F | A | -1.0135 | |
| 424 | S | A | -1.3101 | |
| 425 | Q | A | -1.8061 | |
| 426 | D | A | -2.8770 | |
| 427 | L | A | -1.9698 | |
| 428 | D | A | -2.7597 | |
| 429 | Q | A | -2.5965 | |
| 430 | F | A | -1.4270 | |
| 431 | A | A | -0.8758 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5213 | |
| 435 | K | A | -0.6808 | |
| 436 | F | A | 0.1820 | |
| 437 | L | A | 1.0554 | |
| 438 | Y | A | 0.8472 | |
| 439 | Q | A | -0.2534 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine