Project name: query_structure

Status: done

Started: 2025-11-29 10:08:08
Settings
Chain sequence(s) A: GLPICGETCFKTKCYTKGCSCSYPVCKRN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:32)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:32)
Show buried residues

Minimal score value
-1.97
Maximal score value
1.5426
Average score
-0.1726
Total score value
-5.0061

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.6963
2 L A 0.9232
3 P A 0.6017
4 I A 1.4806
5 C A 0.2754
6 G A -0.0757
7 E A -0.0279
8 T A 0.2521
9 C A 0.0000
10 F A 1.1938
11 K A -1.0005
12 T A -0.9338
13 K A -1.1035
14 C A -0.3204
15 Y A 0.3753
16 T A -0.7032
17 K A -1.7824
18 G A -1.8123
19 C A -1.3209
20 S A -0.9814
21 C A 0.4820
22 S A 0.6675
23 Y A 1.5426
24 P A 1.2965
25 V A 1.1030
26 C A 0.0000
27 K A -0.5690
28 R A -1.9700
29 N A -1.9025
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Laboratory of Theory of Biopolymers 2018