Protein sequence(s) | SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMVLPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQCSGVTFQ input pdb | |
Peptide sequence | DADIAVWAPPVNAQN | |
Simulation mc cycles | 50 | |
Peptide secondary structure psipred | CCCEEEECCCCCCCC | |
Contact information |
|
Receptor residue | Peptide residue |
Receptor residue | Peptide residue |
Receptor residue | Peptide residue |
cluster name | cluster density | average rmsd | max rmsd | number of elements |
cluster_1.pdb ( medoid) | 42.7866 | 2.43067 | 18.4513 | 104 |
cluster_2.pdb ( medoid) | 42.5326 | 2.60976 | 19.5485 | 111 |
cluster_3.pdb ( medoid) | 26.3693 | 3.26137 | 7.58412 | 86 |
cluster_4.pdb ( medoid) | 22.725 | 8.62488 | 23.7463 | 196 |
cluster_5.pdb ( medoid) | 22.548 | 4.65673 | 31.9689 | 105 |
cluster_6.pdb ( medoid) | 17.8961 | 5.97895 | 16.0101 | 107 |
cluster_7.pdb ( medoid) | 17.1769 | 6.57861 | 16.9682 | 113 |
cluster_8.pdb ( medoid) | 10.7552 | 8.36801 | 20.5068 | 90 |
cluster_9.pdb ( medoid) | 8.00494 | 5.24676 | 12.529 | 42 |
cluster_10.pdb ( medoid) | 5.43082 | 8.47018 | 20.871 | 46 |