CABS-dock: 14632d7bed60875

Project name: 14632d7bed60875

Status: done

submitted: 2026-04-20 06:25:02, status changed: 2026-04-20 08:50:25

Project settings

Protein sequence(s)	GQSVSECITEDGRTVAVGDIVWGKIHGFPWWPARVLDISLGQKEDGEPSWREAKVSWFGSPTTSFLSISKLSPFSEFFKLRFNRKKKGMYRKAITEAANAARHVAPEIRELLTQFETSAPATGGVKKP input pdb
Peptide sequence	SAPATGGVKKP
Simulation mc cycles	50
Peptide secondary structure psipred	CCCCCCCCCCC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

Download all files

Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	42.8548	1.61009	6.38721	69
cluster_2.pdb ( medoid)	24.0078	5.7898	24.2162	139
cluster_3.pdb ( medoid)	21.3374	4.59288	16.8872	98
cluster_4.pdb ( medoid)	13.1779	7.36082	26.0164	97
cluster_5.pdb ( medoid)	13.1456	6.69427	19.3094	88
cluster_6.pdb ( medoid)	10.2652	6.81914	24.1432	70
cluster_7.pdb ( medoid)	10.2533	13.9467	35.4777	143
cluster_8.pdb ( medoid)	9.85401	9.13334	38.0478	90
cluster_9.pdb ( medoid)	8.46571	12.0486	39.7437	102
cluster_10.pdb ( medoid)	8.06627	12.8932	39.478	104