CABS-dock: wkz81

Project name: wkz81_14

Status: done

submitted: 2026-01-14 10:30:23, status changed: 2026-01-15 03:10:11

Project settings

Protein sequence(s)	STATLCLGHHAVPNGTLVKTITDDQIEVTNATELVQSSSTGKICNNPHRILDGIDCTLIDALLGDPHCDVFQNETWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEFITEGFTWTGVTQNGGSNACKRGPGSGFFSRLNWLTKSGSTYPVLNVTMPNNDNFDKLYIWGVHHPSTNQEQTSLYVQASGRVTVSTRRSQQTIIPNIGSRPWVRGLSSRISIYWTIVKPGDVLVINSNGNLIAPRGYFKMRTGKSSIMRSDAPIDTCISECITPNGSIPNDKPFQNVNKITYGACPKYVKQNTLKLATGMRNVPEAIAGFIENGWEGMIDGWYGFRHQNSEGTGQAADLKSTQAAIDQINGKLNRVIEKTNEKFHQIEKEFSEVEGRIQDLEKYVEDTKIDLWSYNAELLVALENQHTIDLTDSEMNKLFEKTRRQLRENAEDMGNGCFKIYHKCDNACIESIRNGTYDHDVYRDEALNNRFQ input pdb
Peptide sequence	KSKPIDGLSDENGKLLTEEELEKLT
Simulation mc cycles	50
Peptide secondary structure psipred	CCCCCCCCCCCCCCCCCHHHHHHCC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

Download all files

Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	14.5855	2.60533	18.8127	38
cluster_2.pdb ( medoid)	11.9755	9.01845	37.2723	108
cluster_3.pdb ( medoid)	11.7914	8.56557	26.7392	101
cluster_4.pdb ( medoid)	10.6855	11.9789	35.2777	128
cluster_5.pdb ( medoid)	8.43132	8.6582	27.3675	73
cluster_6.pdb ( medoid)	7.20186	16.2458	46.8394	117
cluster_7.pdb ( medoid)	3.31013	7.25047	31.5853	24
cluster_8.pdb ( medoid)	3.22057	15.2147	33.4424	49
cluster_9.pdb ( medoid)	2.11641	17.01	36.2143	36
cluster_10.pdb ( medoid)	1.51595	21.1089	37.8818	32