CABS-dock: 1a96c346747b0eb

Project name: 1a96c346747b0eb

Status: done

submitted: 2026-01-13 16:25:52, status changed: 2026-01-14 04:42:07

Project settings

Protein sequence(s)	QIIPSNTTSPPTNSTSPPTNATAPAPSPTNTITKAANITKPGCPKQCGNVTVPYPFGIGSGCALDPMFEIDCNVTTPFIGNIQIYDISDAEMRISNFINTKCYSQTGVLIQDIPSWITLGTKSPYTFSTLNRFIVVGCDDGAIVSGNNFANGCPSLCTSTNDIVKGKCMGFGCCQITIPKGLKFFNTTMVTTRNHSLIWSFNPCGHSFLGEASRFEFQGIEDLSDVNFANKIRNNVPIVLDWAIGNLSCVEARKSNDYACLNNSQCVDSDTSLGGYRCSCNSGYIGNPYIGSGCQDIDECADPNTNSCEKICTNIPGSYNCSCPEGYTGDGRKNGRGCIAPNSNSEFPWIK input pdb
Peptide sequence	VEDLITVKGE
Simulation mc cycles	50
Peptide secondary structure psipred	CCCCEEECCC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

Download all files

Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	70.5897	1.4733	7.8932	104
cluster_2.pdb ( medoid)	21.3147	5.44226	23.6049	116
cluster_3.pdb ( medoid)	11.4269	5.42577	17.8444	62
cluster_4.pdb ( medoid)	11.3359	12.8794	43.3681	146
cluster_5.pdb ( medoid)	7.93305	9.58017	32.0145	76
cluster_6.pdb ( medoid)	7.25378	4.68721	13.5064	34
cluster_7.pdb ( medoid)	5.24427	16.3988	41.9743	86
cluster_8.pdb ( medoid)	3.65535	17.5086	39.2256	64
cluster_9.pdb ( medoid)	3.59225	9.46483	22.5875	34
cluster_10.pdb ( medoid)	3.42347	11.392	21.7456	39