Protein sequence(s) | DEAEASKFVEEYDRTSQVVWNEYAEANWNYNTNITTETSKILLQKNMQIANHTLKYGTQARKFDVNQLQNTTIKRIIKKVQDLERAALPAQELEEYNKILLDMETTYSVATVCHPNGSCLQLEPDLTNVMATSRKYEDLLWAWEGWRDKAGRAILQFYPKYVELINQAARLNGYVDAGDSWRSMYETPSLEQDLERLFQELQPLYLNLHAYVRRALHRHYGAQHINLEGPIPAHLLGNMWAQTWSNIYDLVVPFPSAPSMDTTEAMLKQGWTPRRMFKEADDFFTSLGLLPVPPEFWNKSMLEKPTDGREVVCHASAWDFYNGKDFRIKQCTTVNLEDLVVAHHEMGHIQYFMQYKDLPVALREGANPGFHEAIGDVLALSVSTPKHLHSLNLLSSDEHDINFLMKMALDKIAFIPFSYLVDQWRWRVFDGSITKENYNQEWWSLRLKYQGLCPPVPRTQGDFDPGAKFHIPSSVPYIRYFVSFIIQFQFHEALCQAAGHTGPLHKCDIYQSKEAGQRLATAMKLGFSRPWPEAMQLITGQPNMSASAMLSYFKPLLDWLRTENELHGEKLGWP input pdb |
Peptide sequence | VVLQ |
Simulation mc cycles | 50 |
Peptide secondary structure psipred | CCCC |
Receptor residue | Peptide residue |
Receptor residue | Peptide residue |
Receptor residue | Peptide residue |
cluster name | cluster density | average rmsd | max rmsd | number of elements |
cluster_1.pdb ( medoid) | 39.0974 | 6.06178 | 25.5742 | 237 |
cluster_2.pdb ( medoid) | 23.3659 | 4.8789 | 46.8045 | 114 |
cluster_3.pdb ( medoid) | 20.0817 | 2.29065 | 12.0455 | 46 |
cluster_4.pdb ( medoid) | 18.0923 | 4.64287 | 17.1861 | 84 |
cluster_5.pdb ( medoid) | 15.6143 | 7.36505 | 34.5335 | 115 |
cluster_6.pdb ( medoid) | 10.7554 | 6.60136 | 27.4219 | 71 |
cluster_7.pdb ( medoid) | 8.26168 | 8.10973 | 35.8034 | 67 |
cluster_8.pdb ( medoid) | 7.42324 | 17.2431 | 40.5635 | 128 |
cluster_9.pdb ( medoid) | 5.71508 | 18.1975 | 47.8229 | 104 |
cluster_10.pdb ( medoid) | 2.97181 | 11.4408 | 34.9994 | 34 |