CABS-dock: 214c36f5951389f

Project name: 214c36f5951389f

Status: done

submitted: 2026-01-14 13:53:49, status changed: 2026-01-15 02:01:26

Project settings

Protein sequence(s)	QIIPSNTTSPPTNSTSPPTNATAPAPSPTNTITKAANITKPGCPKQCGNVTVPYPFGIGSGCALDPMFEIDCNVTTPFIGNIQIYDISDAEMRISNFINTKCYSQTGVLIQDIPSWITLGTKSPYTFSTLNRFIVVGCDDGAIVSGNNFANGCPSLCTSTNDIVKGKCMGFGCCQITIPKGLKFFNTTMVTTRNHSLIWSFNPCGHSFLGEASRFEFQGIEDLSDVNFANKIRNNVPIVLDWAIGNLSCVEARKSNDYACLNNSQCVDSDTSLGGYRCSCNSGYIGNPYIGSGCQDIDECADPNTNSCEKICTNIPGSYNCSCPEGYTGDGRKNGRGCIAPNSNSEFPWIK input pdb
Peptide sequence	NTHLKIDNFKADDFGTMVRTNGGKQFDDMS
Simulation mc cycles	50
Peptide secondary structure psipred	CCCCCCCCCCCCCCCCEEECCCCCCCCCCC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

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Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	21.199	5.66065	34.8755	120
cluster_2.pdb ( medoid)	16.3412	6.36428	23.7683	104
cluster_3.pdb ( medoid)	15.3066	8.16639	19.5311	125
cluster_4.pdb ( medoid)	11.7253	6.4817	19.32	76
cluster_5.pdb ( medoid)	11.5942	8.62499	17.8293	100
cluster_6.pdb ( medoid)	10.1401	7.49497	21.9994	76
cluster_7.pdb ( medoid)	8.45774	12.06	33.0931	102
cluster_8.pdb ( medoid)	6.90024	4.34768	15.4344	30
cluster_9.pdb ( medoid)	4.38719	11.6248	24.1905	51
cluster_10.pdb ( medoid)	1.58332	10.1053	15.2856	16