CABS-dock: 22c483a4335509f

Project name: 22c483a4335509f

Status: done

submitted: 2026-06-03 14:21:29, status changed: 2026-06-03 18:26:00

Project settings

Protein sequence(s)	LEVSISDGLFLSLGLVSLVENALVVATIAKNRNLHSPMYCFICCLALSDLLVSGSNVLETAVILLLEAGALVARAAVLQQLDNVIDVITCSSMLSSLCFLGAIAVDRYISIFYALRYHSIVTLPRARRAVAAIWVASVVFSTLFIAYYDHVAVLLCLVVFFLAMLVLMAVLYVHMLARACQHAQGIARLHKLKGAVTLTILLGIFFLCWGPFFLHLTLIVLCPEHPTCGCIFKNFNLFLALIICNAIIDPLIYAFHSQELRRT input pdb
Peptide sequence	SYSMEHFRWGKPV
Simulation mc cycles	50
Peptide secondary structure psipred	CCCCCCCCCCCCC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

Download all files

Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	52.2352	3.69482	7.55121	193
cluster_2.pdb ( medoid)	48.7486	2.19494	9.3949	107
cluster_3.pdb ( medoid)	26.2796	4.22382	8.54247	111
cluster_4.pdb ( medoid)	22.6933	3.92187	7.32576	89
cluster_5.pdb ( medoid)	20.0331	6.53919	21.9019	131
cluster_6.pdb ( medoid)	16.2874	8.10441	18.7747	132
cluster_7.pdb ( medoid)	13.3948	5.2259	11.5151	70
cluster_8.pdb ( medoid)	7.97009	11.2922	31.1648	90
cluster_9.pdb ( medoid)	3.98418	12.5496	30.7132	50
cluster_10.pdb ( medoid)	2.64547	10.2061	20.675	27